Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= AAMG01000056.1 Length=332 Score E Sequences producing significant alignments: (Bits) Value seq19326 75.2 2e-11 >seq19326 Length=6529 Score = 75.2 bits (82), Expect = 2e-11 Identities = 94/128 (73%), Gaps = 1/128 (1%) Strand=Plus/Plus Query 203 AGTAACGGAATACTAACCGTTTCTGCCATCGGTCTCGCCGTTCGGCTGAACCTTATGACC 262 |||| |||||| ||||| || | ||||| | || ||||| | | ||| | || Sbjct 1654 AGTATGGGAATATTAACCCATTGT-CCATCCACTACCCCTTTCGGGTTCGCGTTAGGTCC 1712 Query 263 CGACTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTTCGGCGAGGGGGTT 322 ||||| ||||| | | ||||||| | | |||||||||||||||||||| ||| ||||| Sbjct 1713 CGACTAACCCTCAGCTGATTAGCATGGCTGAGGAAACCTTAGTCTTTCGGTGAGCGGGTT 1772 Query 323 TCCCACCC 330 || | ||| Sbjct 1773 TCTCGCCC 1780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 959715100800