Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq17296 84.2 4e-14 >seq17296 Length=1142 Score = 84.2 bits (92), Expect = 4e-14 Identities = 74/91 (81%), Gaps = 1/91 (1%) Strand=Plus/Minus Query 228 AGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATG 287 ||||||||||||||| || |||||| |||| |||||||| || ||||||||| Sbjct 1071 AGAGGTGAAATTCTTAGACCGTCGTAAGACTTACTAAAGCGAAAGCATTTGCCAAGGATG 1012 Query 288 TTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||||||| ||||||||||||| || Sbjct 1011 TTTTCATTAATCA-AGAACGAAAGTTAGAGG 982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914928396096