Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq19326 129 6e-28 seq28529 75.2 1e-11 >seq19326 Length=6529 Score = 129 bits (142), Expect = 6e-28 Identities = 134/172 (78%), Gaps = 3/172 (2%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| ||||||| | || || |||||| ||| |||||||||| |||||||| Sbjct 1374 AAACCGACACAGGTAGTCGAGGAGAGAATCCTAAGGTGCTAGAGTGAATCATGGTTAAGG 1315 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGGG 144 ||||||||||| | | |||||||||||| ||| | | | | ||| ||| || || Sbjct 1314 AACTAGGCAAAATAGTCTCGTAACTTCGGGA-GAAGAGACGCCA-TCAGCAAT-GGTGGC 1258 Query 145 CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 ||||| || ||| |||||| |||||||| |||||||||||| || ||| || Sbjct 1257 CGCAGTAAAAAGGCCCAGGCGACTGTTTATCAAAAACACAGGACTCTGCAAA 1206 >seq28529 Length=1253 Score = 75.2 bits (82), Expect = 1e-11 Identities = 126/182 (69%), Gaps = 8/182 (4%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 || |||| ||||| || | || || |||||||||| | |||| |||| | | | | Sbjct 1052 CGTAAACCGACACTGGTGGATAAGTAGAGTATACTAAGGTG-TTGAAAGAATGATGTTGA 1110 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTAC-------CCAGA 134 ||||||| |||||| | ||||||||||||||| || || ||||| | | Sbjct 1111 AGGAACTCGGCAAATTATACCTGTAACTTCGGGAGAAGGGTAGCCTACTGTTAGGCAACT 1170 Query 135 AATGGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCC 194 | ||| ||| ||| | |||||| || |||||||| ||||||||||| || ||| Sbjct 1171 ATTGGTAGGTGGCACAAAATAGGGAGTAGCGACTGTTTACTAAAAACACAGGACTCTGCA 1230 Query 195 AA 196 || Sbjct 1231 AA 1232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531047282158