Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq19326 417 2e-114 >seq19326 Length=6529 Score = 417 bits (462), Expect = 2e-114 Identities = 398/500 (80%), Gaps = 13/500 (3%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||||||||| || Sbjct 4716 TACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGATTAT 4657 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTC--TGACCCC 118 |||||||||||||| | |||||| |||||||||||| ||| | || |||| Sbjct 4656 GTGGTTTAATTCGATGATACGCGAGGAACCTTACCAAGGCTTAA-ATGGGAATTGACAGG 4598 Query 119 TCTAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTC 178 | |||| ||||| |||| ||||| ||| | ||||| ||||||||||||||| Sbjct 4597 TTTAGAAATAGACTTTTC---TTCGG---ACAATTTTCAAGGTGCTGCATGGTTGTCGTC 4544 Query 179 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTT 238 |||||||| |||||| |||| |||||||||| |||||||||||||||| | ||||| Sbjct 4543 AGCTCGTGCCGTGAGGTGTTAGGTTAAGTCCTGCAACGAGCGCAACCCCTGTCACTAGTT 4484 Query 239 GCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCG-GAGGAAGGTGGG 297 ||||||||| ||||||| |||||| ||||||| | ||| | |||||||||||| Sbjct 4483 GCCATCATTCAGTTGGGGACTCTAGTGAGACTGCCTACG-CAAGTAGAGAGGAAGGTGGG 4425 Query 298 GACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAA 357 || ||||||||||||||| | |||||| | |||||| |||||||| |||||||| | Sbjct 4424 GATGACGTCAAATCATCACGGCCCTTACGCCTTGGGCCACACACGTAATACAATGGCCGG 4365 Query 358 TACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGA 417 |||| |||||||| | |||| | || |||| | |||| | |||||||||||| Sbjct 4364 TACAGAGGGCAGCTACCTAGCGATAGGATGCGAATCTC-GAAAGCCGGTCTCAGTTCGGA 4306 Query 418 TTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CATG 476 ||| |||||||||||||||| |||||||||||||||||||||||||| | ||||| |||| Sbjct 4305 TTGGAGTCTGCAACTCGACTCTATGAAGCTGGAATCGCTAGTAATCGCATATCAGCCATG 4246 Query 477 CTACGGTGAATACGTTCCCG 496 | ||||||||||||||||| Sbjct 4245 ATGCGGTGAATACGTTCCCG 4226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503553657920