Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq19326 205 1e-50 seq29598 104 3e-20 >seq19326 Length=6529 Score = 205 bits (226), Expect = 1e-50 Identities = 147/178 (83%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 ||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||| ||| Sbjct 932 GGGTCTTTTCGTCCCATTGCGGGTACTCGGCATCTTCACCGAGACTACAATTTCACAGAG 991 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 |||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct 992 CTCATGGTTGAGACAGTGCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCCGA 1051 Query 145 CAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTTC 202 ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1052 CAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTC 1109 >seq29598 Length=7608 Score = 104 bits (114), Expect = 3e-20 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||| |||||| | |||||||| | |||||| ||| | | | ||||||| ||| Sbjct 7473 CGGGGTCTCTTCGTCTAACCGCGGGTACCCCGCATCTGCACGGGGAATTCAATTTCGCTG 7532 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | | | | | ||||||| ||| |||||||||| ||||||||||||||| Sbjct 7533 AAGTGATGTTGGAGACAGTGGAGAAATCGTTACGCCATTCGTGCGGGTCGGAACTTACCC 7592 Query 143 GACAAGGAATTTCGCT 158 |||||||||||||||| Sbjct 7593 GACAAGGAATTTCGCT 7608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547042682223