Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq19326 116 7e-24 >seq19326 Length=6529 Score = 116 bits (128), Expect = 7e-24 Identities = 170/238 (71%), Gaps = 7/238 (3%) Strand=Plus/Plus Query 70 CCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTT 129 |||||||||||| ||| ||||| | ||| |||||||| || ||| |||| | ||| Sbjct 5568 CCGTGTCTCAGTACCAGTGTGGGGGATCACCCTCTCAGGCCCCCTAAAGATCACTGACTT 5627 Query 130 GGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCT---TTCAGCGATA 186 ||| ||| ||| | |||||||| |||||| |||| |||||||| | || || Sbjct 5628 GGTAGGCCGTTACCCTACCAACTATCTAATCTTGCGCGTGCCCATCTCTATCCACCG--- 5684 Query 187 AATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCC 246 | ||| | || |||||||| | | | |||||| ||||||| ||| |||| Sbjct 5685 GAGTTTTCAATATCGACTGATGCCAGTCAAT-ATATTATGGGGTATTAATCTTCCTTTCG 5743 Query 247 AAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304 ||| | ||| || || ||||||||||||| |||||||| | ||||||| |||| || Sbjct 5744 AAAGGCTATCCCCCTGATAAAGGCAGGTTGCACACGTGTTCCGCACCCGTACGCCGCT 5801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998103704832