Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq19326 132 3e-29 seq29598 122 6e-26 >seq19326 Length=6529 Score = 132 bits (146), Expect = 3e-29 Identities = 100/118 (85%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| ||||||||||||||||||| | | |||||||||||||||| |||| Sbjct 569 TACCTTTTATCCTATGAGCGATGGCCCTTCCATACGGAACCACCGGATCACTATGTCCTG 628 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||||| ||| || | |||| | |||| || |||||||| ||| ||||||| |||| Sbjct 629 CTTTCGCACCTGATCGACTTGTAGGTCTCACAGTCAAGCACCCTTATGCCATTACACT 686 >seq29598 Length=7608 Score = 122 bits (134), Expect = 6e-26 Identities = 109/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 ||||||||||||||||||||||| ||||||||| || | |||||||||||||||||| Sbjct 7101 TACCTTTTATCCGTTGAGCGATGACCCTTCCATACAGAATCACCGGATCACTATGACCGA 7160 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| |||||| |||| |||||| ||| ||| ||| |||||||| ||||| Sbjct 7161 CTTTCGTCTCTGCTTGGCTTGTCAGCCTCGCAGTCAGGCAAGCTTATGCCATTGTACTAT 7220 Query 121 CACTACGATTTCCGACC 137 | ||||||||||| Sbjct 7221 TAAGCTGATTTCCGACC 7237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351902065900