Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq29598 131 2e-28 seq19326 125 7e-27 >seq29598 Length=7608 Score = 131 bits (144), Expect = 2e-28 Identities = 125/159 (79%), Gaps = 6/159 (4%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||| ||||||||| ||||| |||||||||||||||||| |||||| ||| Sbjct 7113 GTTGAGCGATGACCCTTCCATACAGAATCACCGGATCACTATGACCGACTTTCGTCTCTG 7172 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCAC---TAACCTCACGAT 140 || | |||| |||||||||| || |||||||||||||| || ||| || ||| Sbjct 7173 CTTGGCTTGTCAGCCTCGCAGTCAGGCAAGCTTATGCCATTGTACTATTAAGCT---GAT 7229 Query 141 GTCCGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||||||| ||||| |||||||| | ||||||||| Sbjct 7230 TTCCGACCAGCTCTAGCTTACCTTCGTACGCCTCCGTTA 7268 >seq19326 Length=6529 Score = 125 bits (138), Expect = 7e-27 Identities = 120/154 (78%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 26 TGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCT 85 ||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||| | Sbjct 583 TGAGCGATGGCCCTTCCATACGGAACCACCGGATCACTATGTCCTGCTTTCGCACCTGAT 642 Query 86 CGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTCCG 145 ||| || |||| ||||||||| ||||||||||| |||| | |||| | || Sbjct 643 CGACTTGTAGGTCTCACAGTCAAGCACCCTTATGCCATTACACTCTACGCACGGTTACCA 702 Query 146 ACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | |||| | || ||||| | ||||||||| Sbjct 703 AGCGTGCTGAGGGTACCTTTGAAAGCCTCCGTTA 736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473463841924