Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq8985 75.2 2e-11 >seq8985 Length=7856 Score = 75.2 bits (82), Expect = 2e-11 Identities = 146/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 82 CCAACCTG-AGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTT 140 || ||||| || | ||| | || || |||| |||| | || ||||| || ||| ||| Sbjct 3362 CCCACCTGTAGAATCGCTAAAAAAGCCTCTT-GTGGGACATCAACGTTCCCGACTGCCTT 3304 Query 141 CATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACC 200 ||| ||||||||||| | ||||| |||| | |||||| ||| || || | || || Sbjct 3303 CATACGTTTTTTACCCTCTTTTTGTTTCTGCAACAGCTTCTTCTTGCGACTGATATCGCC 3244 Query 201 GCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGAT 260 ||| || ||||| || | |||||| || | || | | | || | || ||||| | Sbjct 3243 GCCATAACATTTTGCTAATACGTTTTTACGCAGCTGCCTAATGGTAGAACGGGCAATCAC 3184 Query 261 CTGCCCGCCAATGGCGGCCTGGATCGCGACGTC 293 ||| || |||| || ||||| |||| ||| Sbjct 3183 CTGATTCCCGATGGTAGCTTGGATAGCGATGTC 3151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838151188032