Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq19326 80.6 6e-13 >seq19326 Length=6529 Score = 80.6 bits (88), Expect = 6e-13 Identities = 130/184 (71%), Gaps = 15/184 (8%) Strand=Plus/Plus Query 190 CCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTA 249 |||||||||||| ||| ||||||||| | |||||||| |||||| ||| | || Sbjct 5568 CCGTGTCTCAGTACCAGTGTGGGGGATCACCCTCTCAGGCCCCCTAAAGATCACTGACTT 5627 Query 250 GGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATC---GTACACCGATG 306 ||| ||||||||||| || |||| ||||| ||| | |||||| | ||||| | Sbjct 5628 GGTAGGCCGTTACCCTACCAACTATCTAATCTTGCGCGTGCCCATCTCTATCCACCG--G 5685 Query 307 AATCTTTAAT---GA-TGATACCATGCAATCTCATCATACCATCAGGTATTAATCTTTCT 362 | | || ||| || |||| ||| |||| ||| || |||||||||||| || Sbjct 5686 AGTTTTCAATATCGACTGATGCCAGTCAAT------ATATTATGGGGTATTAATCTTCCT 5739 Query 363 TTCG 366 |||| Sbjct 5740 TTCG 5743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068482812224