Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_033305.1 Length=3159 Score E Sequences producing significant alignments: (Bits) Value seq13039 114 3e-22 >seq13039 Length=30492 Score = 114 bits (126), Expect = 3e-22 Identities = 70/74 (95%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 3089 GAAAGGGCATGCATATCATTTTCTGACATACTTTCATTC---aaaaaaaGGTATACGAAA 3145 ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct 12452 GAAAGGGCATGCATATCATTTTCTGACATACTTTCATTCAAAAAAAAAAGGTACACGAAA 12393 Query 3146 TACGAAAAATAAAT 3159 |||||||||||||| Sbjct 12392 TACGAAAAATAAAT 12379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 9993555116820