Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq299 102 1e-19 >seq299 Length=112621 Score = 102 bits (112), Expect = 1e-19 Identities = 159/222 (72%), Gaps = 8/222 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||| ||||| |||| |||| || |||| | |||||| | |||||||||| || | Sbjct 109235 GTACAAAGATCAGGGTCGTAATCAATGCAAGCTAG-TGACTCACACTTACTAGGAGTT-C 109292 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 || ||| | | ||| || || | | ||||| | | || | | | |||| Sbjct 109293 CTGGTTCATGTG-AACTTTTTCAGTCCACAATCCCAACTAGGAAGCTGGCTAAGTGATTT 109351 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| ||| |||| ||||| | | ||||| | ||| |||| | ||||||| | Sbjct 109352 CCCAATCCTCTCGGATAAGGTAACA----CGTTGTCAGCTTCATTGTAACTCGCGTGCCG 109407 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAA 222 ||||||||||||||||||||||| |||||||||||| ||||| Sbjct 109408 CCCAGAACATCTAAGGGCATCACGGACCTGTTATTG-CTCAA 109448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751810407875