Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq299 107 4e-21 >seq299 Length=112621 Score = 107 bits (118), Expect = 4e-21 Identities = 196/285 (69%), Gaps = 38/285 (13%) Strand=Plus/Minus Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATACATTAG 127 |||||||| ||||| |||||| |||| ||||||||||| | |||| ||||| || | Sbjct 110245 ACTTTTACCTTGAACAAATTAAAGTGCTCAAAGCAGGCTTCATATGCTTGAATAGTTTTG 110186 Query 128 CATGGAATAATAGAATAGGACGT----------------GCGGTT---CT---------A 159 ||||||||||| ||| | ||| | |||| | || | Sbjct 110185 CATGGAATAATGGAAAAAGACCTCGGTCTTATTTGTTGCGCGGGTTCGCTCGCGTAATGA 110126 Query 160 TTTTGT--TGGTTTC-TAG-GACC--GCCGTAATGATTAATAGGGATAGTCGGGGGTGTC 213 |||| | |||||| || || | | |||||||||||||| ||| ||||| | Sbjct 110125 TTTTCTATTGGTTTGATACAGATCAAGAGGTAATGATTAATAGAAGCAGTTGGGGGCATT 110066 Query 214 AGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGC 273 |||||| | ||||||||||||||| || ||||||||||| |||||||| Sbjct 110065 AGTATTACGGCGCGAGAGGTGAAATTCTTAGACCGTCGTAAGACTAACTAAAGCGAAAGC 110006 Query 274 GTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 || |||||||||||||||||||||| ||||||||||||| || Sbjct 110005 ATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 109962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914961819200