Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq299 134 6e-29 >seq299 Length=112621 Score = 134 bits (148), Expect = 6e-29 Identities = 118/147 (80%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||||| |||| ||| | |||||| ||| ||||||||||| | ||||||| ||||||| Sbjct 107916 GAGTCATGTTGCTTGATAGTGCAGCATTAAGTGGGAGGTAAACTCCTTCTAAGGCTAAAT 107857 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 ||| | ||||||||||||| ||||||| |||| ||||| ||||||||||| || | Sbjct 107856 ATTACCATGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGCACTCTGAAT 107797 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGT 186 ||||||| ||| || |||||||| ||| Sbjct 107796 AGAGAGTCAAATAGTACGTGAAACTGT 107770 Score = 129 bits (142), Expect = 2e-27 Identities = 97/114 (85%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629 |||||||||||||||||||||||||||| ||| |||| ||| |||||| ||| ||||| Sbjct 107225 GACCCGAAAGATGGTGAACTATGCCTGATCAGGTCGAAGTCAGGGGAAACCCTGATGGAG 107166 Query 630 GCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | || ||| |||||| ||||||||||||| |||| | ||||| |||||||||| Sbjct 107165 GACCGAAGCAGTTCTGACGTGCAAATCGATTGTCAGAATTGGGCATAGGGGCGA 107112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079441763750