Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq299 448 2e-123 >seq299 Length=112621 Score = 448 bits (496), Expect = 2e-123 Identities = 315/358 (88%), Gaps = 5/358 (1%) Strand=Plus/Plus Query 182 ATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACG----GC 237 || || ||||| || | | |||| || ||||||| ||| | |||| || | || Sbjct 105342 ATCGAATAAGTGAAGCAGCAGTAAGAGTGGTGGTATCTCATTGGCGCT-AATTGCTTAGC 105400 Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 |||||| ||| || ||||||| | | |||||| | | ||||||||||||||||||| Sbjct 105401 TCCCACCTATACTGCACCTCTTATACCGCCTCACAATGCCAGACTAGAGTCAAGCTCAAC 105460 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct 105461 AGGGTCTTCTTTCCCCGCTAGTGTTTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 105520 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 105521 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 105580 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 105581 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCT 105640 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct 105641 TGAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACATC 105698 Score = 87.8 bits (96), Expect = 6e-15 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| | ||| || | | ||||||| | | |||| |||| |||||||| |||||| Sbjct 105002 CTTATACTCAACGTGTGGTTTCTGTCCACACTGAGCTGACCTTTGGACACCTCCGTTATT 105061 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAAC 119 |||| |||||| ||||||||| ||||||||||||||| ||||||| || || Sbjct 105062 GTTTTGGAGATGTACCGCCCCAGTCAAACTCCCCACCTGGCAATGTCTTCGAC 105114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634774439200