Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq299 365 1e-98 >seq299 Length=112621 Score = 365 bits (404), Expect = 1e-98 Identities = 399/516 (77%), Gaps = 23/516 (4%) Strand=Plus/Plus Query 5 TCATTCCAATTACAAGACCCA---AAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||| || | || || || ||| ||||| | ||||||||||| Sbjct 110501 TCATTCCAATTACAGAACATAGTTAACTAGTTCTATATTGTTATTTTTCGTCACTACCTC 110560 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 |||||| ||||| |||||||||| ||||||||||||||||||| |||||||||||||||| Sbjct 110561 CCCGTGCCGGGAGTGGGTAATTTACGCGCCTGCTGCCTTCCTTAGATGTGGTAGCCGTTT 110620 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||| Sbjct 110621 CTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTGCAACCATGTTAG 110680 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 || |||| ||| |||| ||||||||||||||||| ||||||| || | ||| |||| | Sbjct 110681 TCCTCTATACTAACATC-AAAGTTGATAGGGCAGACATTTGAAAGATCTGTCGTCGGCAC 110739 Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAAT--CACCA-AGGAGCC---CCGAAGGGCG 295 |||||||| |||| | ||||||| || | ||||| | | | |||||| || Sbjct 110740 AAGGCCATACGATCAGCAAAGTTATCTAGAGTTCCACCATATAAAACAGTCCGAAGACCG 110799 Query 296 -TTGGTTTTTTATCTAATAAATACAC----CCCTTCCGA-AGTCGGGGTTTTTAGCATGT 349 |||| ||| |||||||| | ||| ||| ||| | || | || || |||||| Sbjct 110800 ATTGG---TTTGTCTAATAACTGCACGAGAATCTTACGATACTC-GCATTATTTGCATGT 110855 Query 350 ATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAG-GTACTATCAAATAAACGATAA 408 |||||||||||| || |||| |||||||| ||| | | || ||| || ||| | | Sbjct 110856 ATTAGCTCTAGATTTTCCACAGTTATCCAAGTACTGGGAATATGATCTAAGAAATTACAG 110915 Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATG 468 ||| | || |||||| || || |||||||| ||| | | | |||||||||||||||| Sbjct 110916 CTGTTATACTGAGCCTTTTGCGGTTTCACTTTAT-TTTAGTATGTACTTAGACATGCATG 110974 Query 469 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||| ||||||||| ||| || | |||||| || Sbjct 110975 GCTTAACCTTTGAGACGAGCGTA-CATTACTGGTAG 111009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510006918400