Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq119 286 3e-72
seq343 181 8e-41
>seq119
Length=197918
Score = 286 bits (316), Expect = 3e-72
Identities = 572/838 (68%), Gaps = 25/838 (3%)
Strand=Plus/Minus
Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165
|||| ||||| ||||||||| || ||||| |||||||| || ||||| ||| | ||||
Sbjct 167983 AGGCTGAAGCCAGCTTCTGGACAGTCGAGGAAGTCGATTTATCAAAAGATATGGAAGACT 167924
Query 61166 GGGAGCGTTTATCGAGCGGT--GAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGC 61223
|| | | | | || | || | ||||| || ||||| || || ||||||||
Sbjct 167923 GGAACAATCT--CAAGGATTCAGAGCGTCATTTTATCTCGCATGTATTAGCTTTCTTTGC 167866
Query 61224 CGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGT 61283
|| || || || ||||| |||||||||||| | || |||||| ||||| || |||||
Sbjct 167865 TGCATCTGATGGCATCGTAAATGAGAATTTAATTGAGCGTTTCAGTCAGGAAGTTCAAGT 167806
Query 61284 GTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGAT 61343
| || || || | ||||| || ||||| ||||| ||||| ||||| |||||||||||
Sbjct 167805 TCCAGAAGCTCGATTCTTCTATGGATTCCAAATTGCTATGGAAAATGTACACTCGGAGAT 167746
Query 61344 GTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAA 61403
|||| | | || || || || || || || | | ||||| || |||||
Sbjct 167745 GTACTCAATATTAATTGAAACTTATATTAGAGATGCAAAGCAGCGTGACTTCTTATTCAA 167686
Query 61404 TGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCAC 61463
||| || ||||| | || || ||| ||| || || ||||| || |||||||| |
Sbjct 167685 TGCAATTGAGACACTTCCATGTGTTAAGAAGAAGGCTGACTGGGCTTTAAATTGGATATC 167626
Query 61464 CAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATT 61523
||| | | || | |||||||||||| | | || ||||| | ||||| || | ||
Sbjct 167625 CAGCAAGAATGCAAACTTTGGTGAACGAGTTATTGCTTTTGCAGCTGTCGAAGGGATTTT 167566
Query 61524 TTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCT 61583
|| ||||| ||||| || || |||||| | ||||| | ||| | ||||| || |
Sbjct 167565 CTTTAGTGGTAGCTTTGCAGCTATATTTTGGATTAAGAAGAGAGGATTAATGCCAGGGTT 167506
Query 61584 GACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTT 61643
||| || ||||| | || || | ||||| || | ||| |||| ||||| ||
Sbjct 167505 GACATTTTCAAATGAACTTATTTCGAGAGACGAAGGACTTCATCGTGACTTTGCATGCTT 167446
Query 61644 GCTATTCAAACGCTATCTGGTGAATCG--TCCGTCGGAGGAGCGTGTGGGTGAGATTGTT 61701
| | ||||| |||| |||| | || | |||| | || | ||| ||| |
Sbjct 167445 AATGTACAAAC---ATCT--TGAACAGAAGCCACCAAAGGAAAGAGTAGTTGAAATTATC 167391
Query 61702 CGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATC 61761
||||| |||| || || |||||||| | |||||||| | || || | |
Sbjct 167390 ACAGAGGCTGTAAAAATTGAGAAGGAATTTTTAACTGACGCACTTCCAGTTAAGATGTTG 167331
Query 61762 GGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTC 61821
||||||||||||| ||||| | ||||| || ||||||||||| || | | | ||||
Sbjct 167330 GGCATGAATTGTGATTTAATGACTCAGTACATAGAATTTGTTGCTGATCATTTATTGGGT 167271
Query 61822 GATTTGGG----TATGAAGCGGATCTATAATACGAAAAACCCATT-TGATTTCATGGACA 61876
|| ||||| || ||| |||||||||| ||||| ||||| | |||| |||||
Sbjct 167270 GAATTGGGACTTGATAAAG----TCTATAATACCAAAAATCCATTCTCATTT-ATGGAAT 167216
Query 61877 TGATTTCGCTGGATGGCAAGACGAATTTTTTCGA--GAAACGTGTAGGCGACTATCAA 61932
| ||||| || || |||||||| || || ||||| |||| || || || ||||||
Sbjct 167215 TTATTTCACTTGAGGGCAAGACAAACTTCTTCGAACGAAA--GGTTGGTGAATATCAA 167160
>seq343
Length=103200
Score = 181 bits (200), Expect = 8e-41
Identities = 986/1558 (63%), Gaps = 40/1558 (3%)
Strand=Plus/Plus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCC-TAAGATAGTACATGCCGGT 65136
|| || || ||||| || ||||| ||||| | || || | |||| || ||||| || ||
Sbjct 5014 TCAACAGTAAACTGAATAGCATTTGCAGCGGGTTTTGTTCGTAAG-TAATACATTCCAGT 5072
Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTC 65196
|| || || ||| | || ||||| || || | |||||| ||||||| || ||
Sbjct 5073 TTTCAGTCCCATTTTCCATCCGTAAAAATGAATGGACGTTAATTTCCCATAATTGGGTTC 5132
Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256
|| ||||| ||||| ||||||||||| || || || || |||||||| |||| |||
Sbjct 5133 AGCTACATGAATATTAAACGACTGACTTTGGTCTATAAAAGCTCCACGATCGGCAGACAT 5192
Query 65257 GTCAATGATACGACGTCCCG-ATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315
| ||| | | | | || | || ||||| || || || || | || |||
Sbjct 5193 TTGAATT-TGTGTCTTGACGGAAATTTCCCAAACCGTTTTATATATATTTTTTATATCAT 5251
Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCG 65375
|||||| | |||||| ||| | ||||||| | ||||||||| || |||
Sbjct 5252 CTGGAATTTGCTCAATAGTCTGTATTGAACCATTATTTGCAATAATTTTGTTCTTCATAT 5311
Query 65376 ACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAG-TGACGATTGATGACTTG 65433
|| ||| ||||| || | | || |||| ||| || |||| | |||||
Sbjct 5312 CGTCATCCCATAAACCACGTTCAGTCAAATCCTTGAT--AAGATGGTGATTAACAACTTG 5369
Query 65434 GAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTC 65493
|| || || || |||||||| ||| | || ||| ||||||||| ||
Sbjct 5370 AAATTCACCACTGAGAACACGACGATTATAAACATTACTTGTGTAAGGTTCAAAGCTCTC 5429
Query 65494 AGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTT 65553
| | || || | ||| || ||||| ||||| || ||||| || || | || | ||| ||
Sbjct 5430 ATTATTACCCAAAATCTGAGCAGTTGATGCTGTCGGCATTGGTGCAATTAAGAGTGAATT 5489
Query 65554 TCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACA--TCGGTTTA 65611
||| | || | ||| ||| || | | | ||||| | ||||| |||||
Sbjct 5490 TCGGAGACCAAACTTTTTAATTTTTTCTTTTAGAGCTTCCCAATCCCACAAATCGGTGGG 5549
Query 65612 TCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCG 65671
||| |||| |||||||| | ||| | || | |||| | ||
Sbjct 5550 A-GTCTT-ATCC------CACATATCATATTGTAATACACCTTTTGACACCGGACATCCA 5601
Query 65672 AGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCA 65731
| || | || || |||| | | || | || |||||||| ||| | ||| ||
Sbjct 5602 TCGTAAGTCTCATATGGTCCCAATTGTTCTGCTAATTCACAGCTGGACTCCAATGCACCA 5661
Query 65732 AAATAAATGGTCTCGAAAATGCGTCGATT--AAGTTCACGTGCCTCATCGCTCTCGTACG 65789
||||||| || || || || || |||| || || || | || | || || |
Sbjct 5662 TAATAAATTGTTTCAAATATTTGTTGATTTAAATTTTTCG--CTTCGTTAGATTCATATG 5719
Query 65790 GCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGAT 65849
|||| | ||||| | ||||| || |||| |||||||||||||| || || |||||||
Sbjct 5720 GCATTCTCATCAAAATAAAAGCATCTGCCAATCCTTGAACTCCAATTCCAATAGGACGAT 5779
Query 65850 GACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGAT 65909
| | || || || ||| | || || || || |||||||| | | ||||| ||
Sbjct 5780 GTCTAAAGTTTGACCGTTTAGCTTCTTCAACGGGATAGTAATTTACGTTAATAATTTTAT 5839
Query 65910 TCAAATTGCGTGTCACCACATGCACGATACGTCG--CAATTGTTCGAAATCAAAATGTTT 65967
||||||| | ||| || | | | || || ||||| | || ||| | | | |
Sbjct 5840 TCAAATTCCTTGTGACTATTTTT--GTAACTTCCTTCAATTTGTGAAAGTCATATTCTCT 5897
Query 65968 AGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCA 66027
|||| | || |||||| | | |||| ||||| | || ||
Sbjct 5898 T---CGATTTTGTTTG---------ACAAACATATTTAAAGCAATTGATGCTAAATTACA 5945
Query 66028 GACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCG 66087
|| || | || || | | ||| | || ||||| || || | ||| || ||
Sbjct 5946 AACTGCAACTTCATCCTTACTTGAATATTGTACTATTTCCGTACATAAATTCGAACAACG 6005
Query 66088 TATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTA 66147
||| || || | |||||||||||| || || ||||||| |||||| |||| ||| ||
Sbjct 6006 TATTGTCCCAAGATTCTGTTGATTTGATTTCCGGTTGCATGAATCCTTATACAGCATATA 6065
Query 66148 CGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCAC 66207
|| || || || || ||||| | ||||||||| ||| ||| | | | ||||||| ||
Sbjct 6066 AGGTGTACCAGTTTCTACTTGAGCCTCAATGATTGCGAACCACAAATCTTGTGCCTTTAC 6125
Query 66208 CGTACGTACCGCCCTACCTT-TGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCAC 66266
||| | ||| |||| ||| ||| || ||| || || | | || ||||
Sbjct 6126 TTGACGAATATACCTTCCTTCTGC-TTCATAGCCTTCATAAAGTTTCACAAATTCCTCAC 6184
Query 66267 CCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCT 66326
| | ||| | |||| |||| | | |||||||| | ||||| ||| |
Sbjct 6185 CGTACGATTCAAAAAGACCGGGACTACTATTAGGACACATTAATGACCACATTTCATTGT 6244
Query 66327 GTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTC 66386
||| || |||||||| || | ||| || ||||| | || || || | || | ||||
Sbjct 6245 TTTCAACCCGACGCATGAACAAATCTGGAATCCACAATGCATAAAACATGTCTCTAGCTC 6304
Query 66387 GTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCC 66446
|| || | || |||||| || || || || ||||| || || ||||||
Sbjct 6305 TGACTTCTTCTTTTCCAGTATTTTTCTTTAAATCCAGAAATTCAAAAATATCACCATGCC 6364
Query 66447 ATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGC 66506
| ||||||| || || || |||| ||| |||||| ||||||||||| || || |
Sbjct 6365 AAGGTTCCAAATATATTGCAAACGCGCCTGGACGTTTATTTCCACCTTGGTCAACATAAC 6424
Query 66507 GAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGC 66566
| ||| ||| ||| | || | ||||| || || || || || || | ||||| || |
Sbjct 6425 GTGCGGTATTATTGTATACTCTTAACATTGGAACAAGGCCATTTGAAATCCCATTTGTAC 6484
Query 66567 CGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGC 66624
| | || | |||| ||| || || |||||||| | |||||| ||||| ||
Sbjct 6485 CAGCTATATATGTTCCTTTTGCTCGAATGCAATGAACATTAACACCAATTCCACCTGC 6542
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397441899506000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |