Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq27 223 5e-56 seq67 214 3e-53 seq1 208 1e-51 seq21 199 6e-49 seq113 158 2e-36 seq26 140 5e-31 seq33 73.4 6e-11 >seq27 Length=6825462 Score = 223 bits (246), Expect = 5e-56 Identities = 199/242 (82%), Gaps = 7/242 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| | Sbjct 454363 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 454420 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | ||||||||||| | || || | ||||| | | |||| | || Sbjct 454421 CTCGTTCATGGGGAACAATTGCAAGCCCCAATTCCTAGCACGAAGGAGGTTCAGCGGGTT 454480 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||||||| |||||||||| | || || ||| | | ||||||||||||||||||| Sbjct 454481 ACCCGGACCTTTCGGCCAAGGGAACGCACACGCTGATTCCTTCAGTGTAGCGCGCGTGCG 454540 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238 |||||| |||||||||||||||||||||||||||||| ||||| || |||| | ||||| Sbjct 454541 GCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT--CGTGCGGCTAAA 454597 Query 239 AG 240 || Sbjct 454598 AG 454599 >seq67 Length=2655711 Score = 214 bits (236), Expect = 3e-53 Identities = 197/242 (81%), Gaps = 7/242 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||| |||||||| ||||||||||||| |||||||||||||||| |||||| | Sbjct 1168407 GTACAAAGGGCGGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 1168350 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | ||||||||||| | || || | ||||| | | |||| | || Sbjct 1168349 CTCGTTCATGGGGAACAATTGCAAGCCCCAATTCCTAGCACGAAGGAGGTTCAGCGGGTT 1168290 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||||| | |||||||||| | || || ||| | | ||||||||||||||||||| Sbjct 1168289 ACCCGGACATTTCGGCCAAGGGTGTGCACACGCTGATTCCTTCAGTGTAGCGCGCGTGCG 1168230 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238 |||||| |||||||||||||||||||||||||||||| ||||| || |||| | ||||| Sbjct 1168229 GCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT--CGTGCGGCTAAA 1168173 Query 239 AG 240 || Sbjct 1168172 AG 1168171 >seq1 Length=33720124 Score = 208 bits (230), Expect = 1e-51 Identities = 185/226 (82%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||| | |||||||||||||||| |||||| | Sbjct 17880890 GTACAAAGGGCAGGGACGTAATCAACGCGAGCCT-ATGACTCGCGCTTACTGGGAATT-C 17880833 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | ||||||||||| | || || | ||||| | | |||| | || Sbjct 17880832 CTCGTTCATGGGAAACAATTGCAAGCCCCAATTCCTAGCACGAAGGAGGTTCAGCGGGTT 17880773 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||||||| |||||||||| | || || ||| | | ||||||||||||||||||| Sbjct 17880772 ACCCGGACCTTTCGGCCAAGGGAACGCACACGCTGATTCCTTCAGTGTAGCGCGCGTGCG 17880713 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||||| ||||||||||||||||||||||||||| || ||||| || Sbjct 17880712 GCCCAGGACATCTAAGGGCATCACAGACCTGTTACTG-CTCAATCT 17880668 >seq21 Length=9672676 Score = 199 bits (220), Expect = 6e-49 Identities = 194/242 (80%), Gaps = 16/242 (7%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| |||||||||||||||| |||||| | Sbjct 7172567 GTACAAAGGGCAGGGACATAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATTGC 7172625 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 ||||| | | ||||||||||| ||||| | || | | |||| || || Sbjct 7172626 -TCGTTCATGGAGAACAATTGCAAG-------CCCCA--ATGAAGGAGGTTCAGCGAGTT 7172675 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||||||| |||||||||| | || || ||| | | |||||||||||| |||||| Sbjct 7172676 ACCCGGACCTTTCGGCCAAGGGAACGCACACGCTGATTCCTTCAGTGTAGCGCTCGTGCG 7172735 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238 |||||| |||||||||||||||||||||||||||||| ||||| || |||| | ||||| Sbjct 7172736 GCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT--CGTGCGGCTAAA 7172792 Query 239 AG 240 || Sbjct 7172793 AG 7172794 >seq113 Length=742160 Score = 158 bits (174), Expect = 2e-36 Identities = 182/241 (76%), Gaps = 23/241 (10%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||| ||||||||| ||||||||||||| |||||||||||||||| |||| ||| Sbjct 143640 GTACAAAGGGTAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAA-TTC 143583 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| | | ||||||||||| | || | || ||||| | || | || Sbjct 143582 CTCGTTCATGGGGAACAATTGCAAGCCCCAATTCGCAGCACGAAGGGGTTCAGCGGGGTA 143523 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 |||||||| || |||| ||| | | |||| ||||||||||||||| Sbjct 143522 CCCGGACC-----GCGAAGGGGAT------------TCCTTCAGCGTAGCGCGCGTGCGG 143480 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAAA 239 ||||| |||||||||||||||||||||||||||||| ||| | || |||| | |||||| Sbjct 143479 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCCATCT--CGTGCGGCTAAAA 143423 Query 240 G 240 | Sbjct 143422 G 143422 >seq26 Length=6747920 Score = 140 bits (154), Expect = 5e-31 Identities = 137/172 (80%), Gaps = 5/172 (3%) Strand=Plus/Minus Query 71 ACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTACCCGGACCT 129 || ||||||||||| | || || | ||||| | | |||| | |||||||||||| Sbjct 5494846 ACAAACAATTGCAAGCCCCAATTCCTAGCACGAAGGAGGTTCAGCGGGTTACCCGGACCT 5494787 Query 130 GTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACA 189 |||||||||| | || || ||| | | ||||||||||||||||||||||||| ||| Sbjct 5494786 TTCGGCCAAGGGAACGCACACGCTGATTCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACA 5494727 Query 190 TCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAAAG 240 ||||||||||||||||||||||||||| ||||| || |||| | ||||||| Sbjct 5494726 TCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT--CGTGCGGCTAAAAG 5494678 >seq33 Length=4916808 Score = 73.4 bits (80), Expect = 6e-11 Identities = 51/58 (88%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 218 |||||||||||||||||||| |||| | ||||||| |||| ||||||||||| | ||| Sbjct 3714747 TCAGTGTAGCGCGCGTGCGGACCAGGAAATCTAAGAGCATTACAGACCTGTTGTGGCC 3714804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751989786430