Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq128 217 3e-54 seq41 122 2e-25 seq4 116 7e-24 seq26 98.7 2e-18 seq38 80.6 5e-13 seq113 78.8 2e-12 seq2 77.0 6e-12 seq27 75.2 2e-11 >seq128 Length=163306 Score = 217 bits (240), Expect = 3e-54 Identities = 140/152 (92%), Gaps = 1/152 (1%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||||||| || |||||||||||||||| | |||| |||||||||| |||| | ||| Sbjct 65719 TGGTCCGGCTGGACCTTTCCTTCTGGGGAATCCCATGGCCTTCACTGGCTGTGG-GTGGA 65661 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 65660 ACCAGGACTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 65601 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTT 156 |||||||||||||||||||||||||||||||| Sbjct 65600 TAGCATGGAATAATAGAATAGGACGTGCGGTT 65569 >seq41 Length=5183572 Score = 122 bits (134), Expect = 2e-25 Identities = 203/287 (71%), Gaps = 11/287 (4%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGG-ACTTTTACTTTGAAAAAATTAGAGTGTT 98 ||| ||||| || |||| | || |||| | || ||||| ||||| ||||||||||| | Sbjct 1921013 TGCTCTTCATTGAGTGT-CGAGGTAGCCCGACACGTTTACATTGAACAAATTAGAGTGCT 1921071 Query 99 CAAAGCAGGC------CTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGC 152 ||||||||| || ||| |||||| |||||||||||| ||| ||||| | Sbjct 1921072 TAAAGCAGGCAAAAATCTCTGCCAGAATACTGGTGCATGGAATAATGGAACAGGACCT-T 1921130 Query 153 GGTTCTATTTTGTTGGTTTCTAGGAC-CGCCGTAATGATTAATAGGGATAGTCGGGGGTG 211 |||||||||| |||||| || | || | ||||||| ||| || || |||| | Sbjct 1921131 GGTTCTATTTCGTTGGTCTCCGGAACACAAGATAATGATCAATGTGGCCAGGCGGGAGAA 1921190 Query 212 TCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAA 271 | ||||| || || ||||||||||||||| ||||| ||||| |||||| Sbjct 1921191 TTCGTATTGCGACGTTAGGTGTGAAATTCTTGGATCGTCGTAAGACGCACTACAGCGAAA 1921250 Query 272 GCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 | ||||| |||| || ||| |||| ||||||||||||| || Sbjct 1921251 AAAATTGCCAAGTATGTCTTAATTGATCA-AGAACGAAAGTTAGAGG 1921296 >seq4 Length=17479078 Score = 116 bits (128), Expect = 7e-24 Identities = 181/255 (71%), Gaps = 9/255 (4%) Strand=Plus/Minus Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC------CTTTGCTCGAATACAT 124 || ||||||||||| ||||||| ||| | |||| |||| || ||| ||||| Sbjct 11648653 ACGTTTACTTTGAACAAATTAGTGTGCTTAAAGAAGGCAAAAATCTATGCCAGAATAGTG 11648594 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC-CGCCG 183 |||||||||||| ||| ||||| | |||| |||| | ||| | || | || | | Sbjct 11648593 GCGCATGGAATAATGGAACAGGACCT-TGGTTATATTCTTTTGATCTCCGGTACACAAGG 11648535 Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243 ||||||| ||| ||| || |||||| | ||||| || |||||||||| ||||| Sbjct 11648534 TAATGATCAATGTGGACAGGCGGGGGCATTCGTATTGCGGAGTTAGAGGTGAAAATCTTG 11648475 Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303 ||| ||||| |||| |||||||| | ||||| |||| || ||| |||| | Sbjct 11648474 GATCGTCGCAAGACCCACTATCGCGAAAGCAATTGCCAAGTATGTCTTAATTGATCA-AG 11648416 Query 304 AACGAAAGTTAGGGG 318 |||||||||||| || Sbjct 11648415 AACGAAAGTTAGAGG 11648401 >seq26 Length=6747920 Score = 98.7 bits (108), Expect = 2e-18 Identities = 148/208 (71%), Gaps = 8/208 (4%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| |||||||| |||| || ||| || ||||||||||| ||||||||||| | Sbjct 5493862 TGCTCTTCACTGAGTGTCGAGGTAGGCCGACACGTTTACTTTGAACAAATTAGAGTGCTT 5493921 Query 100 AAAGCAGGC------CTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCG 153 ||||||||| | ||| ||||| |||||||||||| ||| ||||| | | Sbjct 5493922 AAAGCAGGCAAAAATATCTGCCAGAATAGTGGTGCATGGAATAATGGAACAGGACCT-TG 5493980 Query 154 GTTCTATTTTGTTGGTTTCTAGGAC-CGCCGTAATGATTAATAGGGATAGTCGGGGGTGT 212 |||||||| |||| || || | || | |||||||| ||| ||| || |||||| | Sbjct 5493981 GTTCTATTCTGTTAGTCTCCGGAACACAAGGTAATGATCAATGTGGACAGGCGGGGGCAT 5494040 Query 213 CAGTATTCAATTGTCAGAGGTGAAATTC 240 ||||| || ||||||||||||| Sbjct 5494041 TCGTATTGCGGCGTTAGAGGTGAAATTC 5494068 Score = 80.6 bits (88), Expect = 5e-13 Identities = 100/136 (74%), Gaps = 1/136 (1%) Strand=Plus/Plus Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242 |||||||| ||| ||| || |||||| | ||||| || ||||||||||||||| Sbjct 5494122 GTAATGATCAATGTGGACAGGCGGGGGCATTCGTATTGCGGCGTTAGAGGTGAAATTCTT 5494181 Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302 |||| ||||| |||| |||||||| | ||||| |||| || ||| |||| Sbjct 5494182 GGATCGTCGCAAGACGCACTAGAGCGAAAGCAATTGCCAAGTATGTCTTAATTGATCA-A 5494240 Query 303 GAACGAAAGTTAGGGG 318 ||||||||||||| || Sbjct 5494241 GAACGAAAGTTAGAGG 5494256 >seq38 Length=6425308 Score = 80.6 bits (88), Expect = 5e-13 Identities = 104/140 (74%), Gaps = 9/140 (6%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGG-ACTTTTACTTTGAAAAAATTAGAGTGTT 98 ||| |||||||| |||| | || || | | || ||||||||| | ||||||||||| | Sbjct 246223 TGCTCTTCACTGTGTGT-CGAGGTAGACCGACACGTTTACTTTGCACAAATTAGAGTGAT 246281 Query 99 CAAAGCAGGC------CTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGC 152 ||||||||| || ||| ||||| |||||||||||| ||| ||||| | Sbjct 246282 TAAAGCAGGCAAAAATCTCTGCCAGAATAGTGGTGCATGGAATAATGGAACAGGACCT-T 246340 Query 153 GGTTCTATTTTGTTGGTTTC 172 ||||||||| ||||||| || Sbjct 246341 GGTTCTATTCTGTTGGTCTC 246360 >seq113 Length=742160 Score = 78.8 bits (86), Expect = 2e-12 Identities = 120/167 (72%), Gaps = 3/167 (2%) Strand=Plus/Plus Query 153 GGTTCTATTTTGTTGGTTTCTAGGAC-CGCCGTAATGATTAATAGGGATAGTCGGGGGTG 211 ||||||||| ||||||| || | || | |||||||| || || | || |||||| Sbjct 142877 GGTTCTATTCTGTTGGTCTCCGGAACACAAGGTAATGATCAAGTGG-ACAGGCGGGGGCA 142935 Query 212 TCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAA 271 | |||| || ||||||||||||||||||| ||||| |||| |||||| Sbjct 142936 TTCGTATAGCGGCGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGCACTAGAGCGAAA 142995 Query 272 GCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 || | ||||| |||| || ||| |||| ||||||||||||| || Sbjct 142996 GCAATTGCCAAGTATGTCTTAATTGATCA-AGAACGAAAGTTAGAGG 143041 >seq2 Length=21392610 Score = 77.0 bits (84), Expect = 6e-12 Identities = 124/175 (71%), Gaps = 9/175 (5%) Strand=Plus/Minus Query 79 TTTGAAAAAATTAGAGTGTTCAAAGCAGGC------CTTTGCTCGAATACATTAGCATGG 132 |||||| ||||||||||| | ||||||||| || || ||||| |||||| Sbjct 213986 TTTGAACAAATTAGAGTGCTTAAAGCAGGCAAAAATCTCCGCCAGAATAGTGGTGCATGG 213927 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGAC-CGCCGTAAT-GAT 190 |||||| ||| || || | ||||||||| ||||||| || || | ||||| ||| Sbjct 213926 AATAATGGAACAGAACCT-TGGTTCTATTCTGTTGGTCTCCGTAACACAAGGTAATGGAT 213868 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 || ||| || |||||| | ||||| || |||||||||||||||||| Sbjct 213867 CAAAGTGGACAGGCGGGGGCATTCGTATTGCGGCGTTAGAGGTGAAATTCTTGGA 213813 >seq27 Length=6825462 Score = 75.2 bits (82), Expect = 2e-11 Identities = 116/163 (71%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 157 CTATTTTGTTGGTTTCTAGGAC-CGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAG 215 ||||| ||||||| || | || | |||||||| ||| ||| || |||||| | | Sbjct 455178 CTATTCTGTTGGTCTCCGGAACACAAGGTAATGATCAATGTGGACAGGCGGGGGCATTCG 455119 Query 216 TATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGT 275 |||| || | ||||||||||||||||| ||||| |||| |||||| | Sbjct 455118 TATTGCGGCGTTACAGGTGAAATTCTTGGATCGTCGCAAGACGCACTAGAGCGAAACCAA 455059 Query 276 TCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 | ||||| |||| || ||| |||| ||||||||||||| || Sbjct 455058 TTGCCAAGTATGTCTTAATTGATCA-AGAACGAAAGTTAGAGG 455017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915187168896