Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq21 134 6e-29 seq8 127 9e-27 seq16 114 5e-23 seq7 91.5 6e-16 seq123 80.6 1e-12 >seq21 Length=9672676 Score = 134 bits (148), Expect = 6e-29 Identities = 101/119 (85%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 |||| |||||||||||||||||||||||||| ||| |||||||| |||||| |||| Sbjct 4519571 GTTGATACCCGAAAGATGGTGAACTATGCCTGGCCAGGACGAAGCCAGGGGAAACCCTGG 4519512 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||| ||||||| ||||| |||||||||||||||| | ||||||||||||||| Sbjct 4519511 TGGAGGTCCGCAGCGATTCTGACGTGCAAATCGATCGTGGGAGCTGGGTATAGGGGCGA 4519453 >seq8 Length=16625825 Score = 127 bits (140), Expect = 9e-27 Identities = 96/113 (85%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630 |||||||||||||||||||||||||| ||| |||||||| |||||| |||||||||| Sbjct 2119751 ACCCGAAAGATGGTGAACTATGCCTGGCCAGGACGAAGCCAGGGGAAACCCTGGTGGAGG 2119810 Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||| ||||| ||||||||||||||||| ||||||||| ||||| Sbjct 2119811 TCCGCAGCGATTCTGACGTGCAAATCGATCGTCGGGGCTGGGTATAGTGGCGA 2119863 >seq16 Length=9769746 Score = 114 bits (126), Expect = 5e-23 Identities = 93/113 (82%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630 ||||||||||||| |||||||||||| ||| |||||||| | |||| |||||| ||| Sbjct 1347609 ACCCGAAAGATGGCGAACTATGCCTGGCCAGGACGAAGCCAGGGAAAACCCTGGTGTAGG 1347668 Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||| || || |||||||||||||| || | ||||||||||||||| Sbjct 1347669 TCCGCAGCGATTTTGACGTGCAAATCGATCATCGGAGCTGGGTATAGGGGCGA 1347721 >seq7 Length=14356694 Score = 91.5 bits (100), Expect = 6e-16 Identities = 85/110 (77%), Gaps = 11/110 (10%) Strand=Plus/Minus Query 574 CGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTC 633 ||||||||||||||||||||||| |||| |||||| |||| ||||| | Sbjct 11534230 CGAAAGATGGTGAACTATGCCTG-----------GCCAAGGGAAACCCTGGGGGAGGTCC 11534182 Query 634 GCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||| ||||| ||||||||||||| ||| | |||||| |||||||| Sbjct 11534181 GCAGCGATTCTGACGTGCAAATCGATTGTCGGAGCTGGGTAAAGGGGCGA 11534132 >seq123 Length=507449 Score = 80.6 bits (88), Expect = 1e-12 Identities = 100/137 (73%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||||| ||| ||| || |||||| |||| | | |||||| | | ||||| ||| || Sbjct 314191 GAGTCAGGTTTCTTGAGAGTGCAGCCCTAAGCGCGTGGTAAACTCCATCTAAGGCTTCAT 314250 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||||||||||||| | ||||| |||| ||||| ||||||| |||||| | Sbjct 314251 ACAACTACGAGACCGATAGCGAATAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAG 314310 Query 160 AGAGAGTTAAAAAGCAC 176 |||||||| || || || Sbjct 314311 AGAGAGTTCAAGAGTAC 314327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079969927100