Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01]
1,402 sequences; 650,477,627 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq21 134 6e-29
seq8 127 9e-27
seq16 114 5e-23
seq7 91.5 6e-16
seq123 80.6 1e-12
>seq21
Length=9672676
Score = 134 bits (148), Expect = 6e-29
Identities = 101/119 (85%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624
|||| |||||||||||||||||||||||||| ||| |||||||| |||||| ||||
Sbjct 4519571 GTTGATACCCGAAAGATGGTGAACTATGCCTGGCCAGGACGAAGCCAGGGGAAACCCTGG 4519512
Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||| ||||||| ||||| |||||||||||||||| | |||||||||||||||
Sbjct 4519511 TGGAGGTCCGCAGCGATTCTGACGTGCAAATCGATCGTGGGAGCTGGGTATAGGGGCGA 4519453
>seq8
Length=16625825
Score = 127 bits (140), Expect = 9e-27
Identities = 96/113 (85%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630
|||||||||||||||||||||||||| ||| |||||||| |||||| ||||||||||
Sbjct 2119751 ACCCGAAAGATGGTGAACTATGCCTGGCCAGGACGAAGCCAGGGGAAACCCTGGTGGAGG 2119810
Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| ||||| ||||||||||||||||| ||||||||| |||||
Sbjct 2119811 TCCGCAGCGATTCTGACGTGCAAATCGATCGTCGGGGCTGGGTATAGTGGCGA 2119863
>seq16
Length=9769746
Score = 114 bits (126), Expect = 5e-23
Identities = 93/113 (82%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630
||||||||||||| |||||||||||| ||| |||||||| | |||| |||||| |||
Sbjct 1347609 ACCCGAAAGATGGCGAACTATGCCTGGCCAGGACGAAGCCAGGGAAAACCCTGGTGTAGG 1347668
Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || || |||||||||||||| || | |||||||||||||||
Sbjct 1347669 TCCGCAGCGATTTTGACGTGCAAATCGATCATCGGAGCTGGGTATAGGGGCGA 1347721
>seq7
Length=14356694
Score = 91.5 bits (100), Expect = 6e-16
Identities = 85/110 (77%), Gaps = 11/110 (10%)
Strand=Plus/Minus
Query 574 CGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTC 633
||||||||||||||||||||||| |||| |||||| |||| ||||| |
Sbjct 11534230 CGAAAGATGGTGAACTATGCCTG-----------GCCAAGGGAAACCCTGGGGGAGGTCC 11534182
Query 634 GCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||| ||||| ||||||||||||| ||| | |||||| ||||||||
Sbjct 11534181 GCAGCGATTCTGACGTGCAAATCGATTGTCGGAGCTGGGTAAAGGGGCGA 11534132
>seq123
Length=507449
Score = 80.6 bits (88), Expect = 1e-12
Identities = 100/137 (73%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
||||| ||| ||| || |||||| |||| | | |||||| | | ||||| ||| ||
Sbjct 314191 GAGTCAGGTTTCTTGAGAGTGCAGCCCTAAGCGCGTGGTAAACTCCATCTAAGGCTTCAT 314250
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||||||||||||| | ||||| |||| ||||| ||||||| |||||| |
Sbjct 314251 ACAACTACGAGACCGATAGCGAATAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAG 314310
Query 160 AGAGAGTTAAAAAGCAC 176
|||||||| || || ||
Sbjct 314311 AGAGAGTTCAAGAGTAC 314327
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079969927100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |