Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq89 322 1e-85 seq48 206 7e-51 seq158 150 5e-34 >seq89 Length=3091062 Score = 322 bits (356), Expect = 1e-85 Identities = 311/397 (78%), Gaps = 2/397 (1%) Strand=Plus/Plus Query 15 AAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCG 74 |||| |||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct 1472157 AAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTATCCG 1472216 Query 75 GAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGG 134 |||||| ||||||||||||| ||| |||||||| |||| | | ||||||| ||| || Sbjct 1472217 GAATTATTGGGCGTAAAGCGCGCGTAGGCGGTTTCTTAAGTCTGATGTGAAAGCCCACGG 1472276 Query 135 CTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAAT 194 || |||| ||| |||| | |||| ||| ||||| ||||| ||||||| Sbjct 1472277 CTCAACCGTGGAGGGTCATTGGAAACTGGGAAACTTGAGTGCAGAAGAGGAAAGTGGAAT 1472336 Query 195 TCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCC 254 |||| ||||||| |||||||||| ||| || ||||||||||||| |||||||||| | Sbjct 1472337 TCCATGTGTAGCGGTGAAATGCGCAGAGATATGGAGGAACACCAGTGGCGAAGGCGACTT 1472396 Query 255 CCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 314 |||| | ||||||||| ||| |||||||||||||| ||||||||||||||||||| Sbjct 1472397 TCTGGTCTGTAACTGACGCTGATGTGCGAAAGCGTGGGGATCAAACAGGATTAGATACCC 1472456 Query 315 TGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTT-GGGGATTTAC-TTCCTTGGTAA 372 |||||||||||||| |||||||| ||| |||| |||| ||| | |||| || Sbjct 1472457 TGGTAGTCCACGCCGTAAACGATGAGTGCTAAGTGTTAGGGGGTTTCCGCCCCTTAGTGC 1472516 Query 373 CGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | ||||||||| | ||| ||||||||||| ||| Sbjct 1472517 TGCAGCTAACGCATTAAGCACTCCGCCTGGGGAGTAC 1472553 Score = 127 bits (140), Expect = 5e-27 Identities = 84/93 (90%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 15 AAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCG 74 |||| |||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct 1198011 AAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTATCCG 1198070 Query 75 GAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 |||||| ||||||||||||| ||| |||||||| Sbjct 1198071 GAATTATTGGGCGTAAAGCGCGCGTAGGCGGTT 1198103 >seq48 Length=4448091 Score = 206 bits (228), Expect = 7e-51 Identities = 218/287 (76%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 10 AGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTT 69 |||| ||| | |||||||| |||||||||||||||||||||||| || | || |||||| Sbjct 3382891 AGAAGAAGTCCTGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGAGGGCTAGCGTT 3382832 Query 70 AATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCC 129 | ||||||||| ||||||||||| | ||| |||| | | ||||| | ||||||||| Sbjct 3382831 ATTCGGAATTATTGGGCGTAAAGAGCGCGTAGGCTGGTTAGTAAGTTAAAAGTGAAATCC 3382772 Query 130 CCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGT 189 | ||| ||| | |||||||| ||| ||||| |||||| || ||||| | Sbjct 3382771 CAAAGCTCAACTTTGGAATTGCTTTTAAAACTGCTAACCTAGAGATTGAAAGAGGATAGA 3382712 Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||||| |||||| ||||||| |||| |||| |||||||||||| |||||||||| Sbjct 3382711 GGAATTCCTAGTGTAGAGGTGAAATTCGTAAATATTAGGAGGAACACCAGTGGCGAAGGC 3382652 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGC 296 | |||| || |||||||| | || |||| ||||| ||||| Sbjct 3382651 GTCTATCTGGTTCAAATCTGACGCTGAGGCGCGAAGGCGTGAGGAGC 3382605 >seq158 Length=85213 Score = 150 bits (166), Expect = 5e-34 Identities = 160/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 200 GTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGG 259 |||||| ||||||| |||| |||| |||||||||||| |||||||||| | |||| Sbjct 25601 GTGTAGAGGTGAAATTCGTAAATATTAGGAGGAACACCAGTGGCGAAGGCGTCTATCTGG 25660 Query 260 GATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTA 319 || |||||||| | || |||| |||||||||||||||||||||||||||||||||| Sbjct 25661 TTCAAATCTGACGCTGAGGCGCGAAGGCGTGGGGAGCAAACAGGATTAGATACCCTGGTA 25720 Query 320 GTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACTTCCTTGGTAACGTAGCT 379 |||||||| |||||||| || | | || ||||||| || ||| |||| Sbjct 25721 GTCCACGCTGTAAACGATGAATGTTAAATATGGGAAGTTTACTTTCT--GTATTACAGCT 25778 Query 380 AACGCGTGAAGTTGACCGCCTGGGGAATAC 409 ||||||| || ||||||||||| ||| Sbjct 25779 AACGCGTTAAACATTCCGCCTGGGGACTAC 25808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289581919808