Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq89 836 0.0 seq158 464 2e-128 seq56 134 4e-29 seq20 107 6e-21 seq100 91.5 4e-16 seq191 86.0 2e-14 >seq89 Length=3091062 Score = 836 bits (926), Expect = 0.0 Identities = 483/496 (97%), Gaps = 0/496 (0%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1472551 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 1472610 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct 1472611 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTTTGAAAACTC 1472670 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 ||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct 1472671 TAGAGATAGAGCCCTCCCCTTCGGGGGACAAAGTGACAGGTGGTGCATGGTTGTCGTCAG 1472730 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1472731 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 1472790 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1472791 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAT 1472850 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1472851 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 1472910 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1472911 AAAGGGCAGCTAAACCGCGAGGTCATGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 1472970 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTAC 480 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1472971 TAGTCTGCAACTCGACTACATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTAC 1473030 Query 481 GGTGAATACGTTCCCG 496 |||||||||||||||| Sbjct 1473031 GGTGAATACGTTCCCG 1473046 >seq158 Length=85213 Score = 464 bits (514), Expect = 2e-128 Identities = 411/506 (81%), Gaps = 17/506 (3%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 25806 TACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 25865 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTC-TGACCCCT 119 |||||||||||||| |||||||||| |||||||||| |||||||| | | ||| Sbjct 25866 GTGGTTTAATTCGATGCAACGCGAAAAACCTTACCACTCCTTGACATGGAAATCATACCT 25925 Query 120 CT----AGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTG---ACAGGTGATGCATGGTT 172 | || ||||| ||| | ||||| | || | ||||||| ||||||| | Sbjct 25926 ATTCGAAGGGATAG-GGT---CGGTTCGGCCG---GATTTCACACAGGTGTTGCATGGCT 25978 Query 173 GTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGC 232 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | Sbjct 25979 GTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGTAACCCTCATCC 26038 Query 233 TTAGTTGCCATCAT-TAA-GTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGA 290 |||||| ||||| ||| | |||| ||| |||| ||||| |||| |||| |||||| Sbjct 26039 TTAGTTACCATCGGGTAATGCTGGGGACTTTAAGGAAACTGCTAGTGATAAACTGGAGGA 26098 Query 291 AGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAA 350 ||||||||| || ||||| |||||||| || ||||| ||||||||||||||||||||| Sbjct 26099 AGGTGGGGATGATGTCAAGTCATCATGGCCTTTATGGAGTGGGCTACACACGTGCTACAA 26158 Query 351 TGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCA 410 ||| ||||| |||| || || ||||||| |||| |||| | |||| ||||| Sbjct 26159 TGGTGGCTACAATGGGCTGCAAAGTCGCGAGGCTAAGCTAATCTCTTAAAAGCCATCTCA 26218 Query 411 GTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATC 470 |||||||||||| |||||||||||| | |||||| ||||||||||||||||||| |||| Sbjct 26219 GTTCGGATTGTACTCTGCAACTCGAGTGCATGAAGTTGGAATCGCTAGTAATCGTGGATC 26278 Query 471 AGCATGCTACGGTGAATACGTTCCCG 496 ||||||| ||||||||||||||| || Sbjct 26279 AGCATGCCACGGTGAATACGTTCTCG 26304 >seq56 Length=3381248 Score = 134 bits (148), Expect = 4e-29 Identities = 95/109 (87%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| ||||||| | ||||||||| |||||||||||| |||||||| | |||||| || Sbjct 1868735 TACGGTCGCAAGGATAAAACTCAAATGAATTGACGGGGGACCGCACAAACTGTGGAGAAT 1868676 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCC 109 |||||||||||||| |||||||||||||||||||| | |||| |||||| Sbjct 1868675 GTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTACTCTTAACATCC 1868627 >seq20 Length=9936027 Score = 107 bits (118), Expect = 6e-21 Identities = 109/140 (78%), Gaps = 3/140 (2%) Strand=Plus/Minus Query 155 GACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAA 214 ||||| || |||| || ||| |||| || |||| |||| ||||||||||||||| | ||| Sbjct 4676581 GACAGATGCTGCACGGCTGTGGTCAACTTGTGTGGTGAAATGTTGGGTTAAGTCTCACAA 4676522 Query 215 CGAGCGCAACCCTTAAGCTTAGTTGCCATC--ATTAAGTTGGGCACTCTAAGTTGACTGC 272 ||||||||||||| | ||| ||||||| | | ||| || ||| ||| ||||| Sbjct 4676521 CGAGCGCAACCCTGATCCTTTGTTGCCAGCGAGTGCAGTCGGAATCTCAAAGGAGACTG- 4676463 Query 273 CGGTGACAAACCGGAGGAAG 292 |||||| |||| |||||||| Sbjct 4676462 CGGTGATAAACTGGAGGAAG 4676443 >seq100 Length=1718286 Score = 91.5 bits (100), Expect = 4e-16 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 411 GTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATC 470 || ||||||| ||||| |||||||||| |||||| ||||||||||| ||||| |||| Sbjct 1323670 GTCCGGATTGGAGTCTCCAACTCGACTCAATGAAGTCGGAATCGCTAGAAATCGCGGATC 1323611 Query 471 AGCATGCTACGGTGAATACGTTCCC 495 |||||| | ||||| ||||||||| Sbjct 1323610 AGCATGTCAGGGTGATTACGTTCCC 1323586 >seq191 Length=42479 Score = 86.0 bits (94), Expect = 2e-14 Identities = 133/186 (72%), Gaps = 7/186 (4%) Strand=Plus/Plus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||||||| || | || | ||||||| | |||||| ||| | | |||||||| Sbjct 20888 CAAGTCATCATGGCCTTAATACTGTGGGCTATAGACGTGCCACATATGCCTTTACAAAGG 20947 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCC---ATAAAGTTGTTCTCAGTTCGGATTGTA 422 | |||| | || | ||| |||||| | |||| | | | | | |||||||| Sbjct 20948 GATGCGATTTTGTGAAATTGAGCTAATCCCCCAAAAAAG--GATATAATAT-GGATTGTA 21004 Query 423 GTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCAT-GCTACG 481 ||||| |||||||||| ||||| ||||| ||||||||||| |||| ||| | ||| Sbjct 21005 GTCTGTAACTCGACTACATGAATAAGGAATTACTAGTAATCGTGAATCACCATCGTCACG 21064 Query 482 GTGAAT 487 |||||| Sbjct 21065 GTGAAT 21070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503978913920