Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq26 223 6e-56 seq113 217 2e-54 seq21 215 8e-54 seq1 196 8e-48 seq27 185 1e-44 seq67 152 8e-35 seq33 73.4 6e-11 >seq26 Length=6747920 Score = 223 bits (246), Expect = 6e-56 Identities = 206/257 (80%), Gaps = 12/257 (5%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 5494759 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 5494700 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-AGCCACCAACCAT 130 | |||| || | |||| ||||| ||||| ||||||| | | | | Sbjct 5494699 C-TCAATCT-CGTGCGGCTAAAAGCCGCCTGTCCCCTTAAGAAGAATATTGTTCGCCGGT 5494642 Query 131 AG--TCGAT-------GGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 || ||||| | | ||| ||| ||| || ||||||||||||||||||||||| Sbjct 5494641 AGATTCGATACCAAACGCGTCTAGTTAATAGGCTAGAGTCTCGTTCGTTATCGGAATTAA 5494582 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 5494581 CCAGACAAATCGATCCACCAACTAAGAACGGCCATGCACCACTACCCACTGAATCAAGAA 5494522 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 5494521 AGAGCTATCAATCTGTC 5494505 >seq113 Length=742160 Score = 217 bits (240), Expect = 2e-54 Identities = 205/257 (80%), Gaps = 12/257 (5%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 143503 TCCTTCAGCGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 143444 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-AGCCACCAACCAT 130 | || | || | |||| ||||| | ||||| ||||||| | | | | Sbjct 143443 C-TCCATCT-CGTGCGGCTAAAAGCCGCTTGTCCCCTTAAGAAGAATATTGTTCGCCGGT 143386 Query 131 AG--TCGAT-------GGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 || ||||| | | ||| ||| ||| || ||||||||||||||||||||||| Sbjct 143385 AGATTCGATACCAAACGCGTCTAGTTAATAGGCTAGAGTCTCGTTCGTTATCGGAATTAA 143326 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 143325 CCAGACAAATCGATCCACCAACTAAGAACGGCCATGCACCACTACCCACTGAATCAAGAA 143266 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 143265 AGAGCTATCAATCTGTC 143249 >seq21 Length=9672676 Score = 215 bits (238), Expect = 8e-54 Identities = 205/257 (80%), Gaps = 15/257 (6%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct 7172713 TCCTTCAGTGTAGCGCTCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 7172772 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-AGCCACCAACCAT 130 | |||| || | |||| ||||| ||||| ||||||| | | | | Sbjct 7172773 C-TCAATCT-CGTGCGGCTAAAAGCCT---GTCCCCTTAAGAAGAATATTGTTCGCCGGT 7172827 Query 131 AG--TCGAT-------GGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 || ||||| | | ||| ||| ||| || ||||||||||||||||||||||| Sbjct 7172828 AGATTCGATACCAAACGCGTCTAGTTAATAGGCTAGAGTCTCGTTCGTTATCGGAATTAA 7172887 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 7172888 CCAGACAAATCGATCCACCAACTAAGAACGGCCATGCACCACTACCCAATGAATCAAGAA 7172947 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 7172948 AGAGCTATCAATCTGTC 7172964 Score = 138 bits (152), Expect = 2e-30 Identities = 99/113 (88%), Gaps = 1/113 (1%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| ||| ||| || |||||||||||||||||||||||||||||||||| ||||||| Sbjct 6814049 CTAGTTAATAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGATCCACCA 6814108 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATC 254 |||||||||||||||||||||| ||||| |||||||| | |||||| ||||| Sbjct 6814109 ACTAAGAACGGCCATGCACCACTACCCACTGAATCAAG-AGGAGCTACCAATC 6814160 >seq1 Length=33720124 Score = 196 bits (216), Expect = 8e-48 Identities = 201/257 (78%), Gaps = 13/257 (5%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct 17880735 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTACTG 17880676 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-AGCCACCAACCAT 130 | |||| || | | |||| ||| || ||||| ||||||| | | | | Sbjct 17880675 C-TCAATCT-CGAGCGGCTAGAATCCGCCTGTCCCCTTAAGAAGAATATTGTTCGCCGGT 17880618 Query 131 AG--TCGAT-------GGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 || ||||| | | ||| ||| ||| | ||||||||||||||||||||||| Sbjct 17880617 AGATTCGATACCAAACGCGTCTAGTTAATAGGCTTGAGTCTCGTTCGTTATCGGAATTAA 17880558 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||| |||||||||||||||| ||||||||||| ||||| || ||||||| Sbjct 17880557 CCAGACAAATCGATCCACCAACTAAGAACAGCCATGCACCA-TACCCACTGATTCAAGAA 17880499 Query 242 AGAGCTATCAATCTGTC 258 || |||||||||||||| Sbjct 17880498 AGTGCTATCAATCTGTC 17880482 >seq27 Length=6825462 Score = 185 bits (204), Expect = 1e-44 Identities = 199/257 (77%), Gaps = 16/257 (6%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 454518 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 454577 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-AGCCACCAACCAT 130 | |||| || | |||| ||||| ||||| ||||||| | | | | Sbjct 454578 C-TCAATCT-CGTGCGGCTAAAAGCCGCCTGTCCCCTTAAGAAGAATATTGTTCGCCGGT 454635 Query 131 AG--TCGAT-------GGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 || ||||| | | ||| ||| ||| || ||||||||||||||||||||| Sbjct 454636 AGATTCGATACCAAACGCGTCTAGTTAATAGGCTAGAGTCTCGTTCGTTATCGGAATT-- 454693 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||| |||||||||||||||| |||||| ||||| ||||| ||||| |||| Sbjct 454694 -CAGACAAATCGATCCACCAACTAAGAACCGCCATG-ACCACTACCCACTGAATCGAGAA 454751 Query 242 AGAGCTATCAATCTGTC 258 |||||||||||||| || Sbjct 454752 AGAGCTATCAATCTATC 454768 >seq67 Length=2655711 Score = 152 bits (168), Expect = 8e-35 Identities = 184/245 (75%), Gaps = 18/245 (7%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1168252 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 1168193 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG-CCAGCCACCAACCAT 130 ||||| | || |||| ||||| ||||| ||||||| | | | | Sbjct 1168192 -CTCAATC-TCGTGCGGCTAAAAGCCGCCTGTCCCCTTAAGAAGAATATTGTTCGCCGGT 1168135 Query 131 AG--TCGAT-------GGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 || ||||| | | ||| ||| ||| | | ||||||||||| ||| ||||||| Sbjct 1168134 AGATTCGATACCAAACGCGTCTAGTTAATAGGCTGA-GTCTCGTTCGTCATCAGAATTAA 1168076 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||| ||||||||||||||||| ||| ||| || | |||||||||| Sbjct 1168075 CCAGACAAATCGATCCACCAACTAAGAACG-----GCATCACTACAAACTGAATCAAGAA 1168021 Query 242 AGAGC 246 ||||| Sbjct 1168020 AGAGC 1168016 >seq33 Length=4916808 Score = 73.4 bits (80), Expect = 6e-11 Identities = 51/58 (88%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 73 |||||||||||||||||||| |||| | ||||||| |||| ||||||||||| | ||| Sbjct 3714747 TCAGTGTAGCGCGCGTGCGGACCAGGAAATCTAAGAGCATTACAGACCTGTTGTGGCC 3714804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796789177962