Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01]
1,402 sequences; 650,477,627 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq26 223 6e-56
seq113 217 2e-54
seq21 215 8e-54
seq1 196 8e-48
seq27 185 1e-44
seq67 152 8e-35
seq33 73.4 6e-11
>seq26
Length=6747920
Score = 223 bits (246), Expect = 6e-56
Identities = 206/257 (80%), Gaps = 12/257 (5%)
Strand=Plus/Minus
Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71
||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 5494759 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 5494700
Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-AGCCACCAACCAT 130
| |||| || | |||| ||||| ||||| ||||||| | | | |
Sbjct 5494699 C-TCAATCT-CGTGCGGCTAAAAGCCGCCTGTCCCCTTAAGAAGAATATTGTTCGCCGGT 5494642
Query 131 AG--TCGAT-------GGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
|| ||||| | | ||| ||| ||| || |||||||||||||||||||||||
Sbjct 5494641 AGATTCGATACCAAACGCGTCTAGTTAATAGGCTAGAGTCTCGTTCGTTATCGGAATTAA 5494582
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 5494581 CCAGACAAATCGATCCACCAACTAAGAACGGCCATGCACCACTACCCACTGAATCAAGAA 5494522
Query 242 AGAGCTATCAATCTGTC 258
|||||||||||||||||
Sbjct 5494521 AGAGCTATCAATCTGTC 5494505
>seq113
Length=742160
Score = 217 bits (240), Expect = 2e-54
Identities = 205/257 (80%), Gaps = 12/257 (5%)
Strand=Plus/Minus
Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71
||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 143503 TCCTTCAGCGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 143444
Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-AGCCACCAACCAT 130
| || | || | |||| ||||| | ||||| ||||||| | | | |
Sbjct 143443 C-TCCATCT-CGTGCGGCTAAAAGCCGCTTGTCCCCTTAAGAAGAATATTGTTCGCCGGT 143386
Query 131 AG--TCGAT-------GGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
|| ||||| | | ||| ||| ||| || |||||||||||||||||||||||
Sbjct 143385 AGATTCGATACCAAACGCGTCTAGTTAATAGGCTAGAGTCTCGTTCGTTATCGGAATTAA 143326
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 143325 CCAGACAAATCGATCCACCAACTAAGAACGGCCATGCACCACTACCCACTGAATCAAGAA 143266
Query 242 AGAGCTATCAATCTGTC 258
|||||||||||||||||
Sbjct 143265 AGAGCTATCAATCTGTC 143249
>seq21
Length=9672676
Score = 215 bits (238), Expect = 8e-54
Identities = 205/257 (80%), Gaps = 15/257 (6%)
Strand=Plus/Plus
Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71
||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct 7172713 TCCTTCAGTGTAGCGCTCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 7172772
Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-AGCCACCAACCAT 130
| |||| || | |||| ||||| ||||| ||||||| | | | |
Sbjct 7172773 C-TCAATCT-CGTGCGGCTAAAAGCCT---GTCCCCTTAAGAAGAATATTGTTCGCCGGT 7172827
Query 131 AG--TCGAT-------GGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
|| ||||| | | ||| ||| ||| || |||||||||||||||||||||||
Sbjct 7172828 AGATTCGATACCAAACGCGTCTAGTTAATAGGCTAGAGTCTCGTTCGTTATCGGAATTAA 7172887
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 7172888 CCAGACAAATCGATCCACCAACTAAGAACGGCCATGCACCACTACCCAATGAATCAAGAA 7172947
Query 242 AGAGCTATCAATCTGTC 258
|||||||||||||||||
Sbjct 7172948 AGAGCTATCAATCTGTC 7172964
Score = 138 bits (152), Expect = 2e-30
Identities = 99/113 (88%), Gaps = 1/113 (1%)
Strand=Plus/Plus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
||| ||| ||| || |||||||||||||||||||||||||||||||||| |||||||
Sbjct 6814049 CTAGTTAATAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGATCCACCA 6814108
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATC 254
|||||||||||||||||||||| ||||| |||||||| | |||||| |||||
Sbjct 6814109 ACTAAGAACGGCCATGCACCACTACCCACTGAATCAAG-AGGAGCTACCAATC 6814160
>seq1
Length=33720124
Score = 196 bits (216), Expect = 8e-48
Identities = 201/257 (78%), Gaps = 13/257 (5%)
Strand=Plus/Minus
Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71
||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct 17880735 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTACTG 17880676
Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-AGCCACCAACCAT 130
| |||| || | | |||| ||| || ||||| ||||||| | | | |
Sbjct 17880675 C-TCAATCT-CGAGCGGCTAGAATCCGCCTGTCCCCTTAAGAAGAATATTGTTCGCCGGT 17880618
Query 131 AG--TCGAT-------GGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
|| ||||| | | ||| ||| ||| | |||||||||||||||||||||||
Sbjct 17880617 AGATTCGATACCAAACGCGTCTAGTTAATAGGCTTGAGTCTCGTTCGTTATCGGAATTAA 17880558
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||| |||||||||||||||| ||||||||||| ||||| || |||||||
Sbjct 17880557 CCAGACAAATCGATCCACCAACTAAGAACAGCCATGCACCA-TACCCACTGATTCAAGAA 17880499
Query 242 AGAGCTATCAATCTGTC 258
|| ||||||||||||||
Sbjct 17880498 AGTGCTATCAATCTGTC 17880482
>seq27
Length=6825462
Score = 185 bits (204), Expect = 1e-44
Identities = 199/257 (77%), Gaps = 16/257 (6%)
Strand=Plus/Plus
Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71
||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 454518 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 454577
Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-AGCCACCAACCAT 130
| |||| || | |||| ||||| ||||| ||||||| | | | |
Sbjct 454578 C-TCAATCT-CGTGCGGCTAAAAGCCGCCTGTCCCCTTAAGAAGAATATTGTTCGCCGGT 454635
Query 131 AG--TCGAT-------GGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
|| ||||| | | ||| ||| ||| || |||||||||||||||||||||
Sbjct 454636 AGATTCGATACCAAACGCGTCTAGTTAATAGGCTAGAGTCTCGTTCGTTATCGGAATT-- 454693
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
|||||||||| |||||||||||||||| |||||| ||||| ||||| ||||| ||||
Sbjct 454694 -CAGACAAATCGATCCACCAACTAAGAACCGCCATG-ACCACTACCCACTGAATCGAGAA 454751
Query 242 AGAGCTATCAATCTGTC 258
|||||||||||||| ||
Sbjct 454752 AGAGCTATCAATCTATC 454768
>seq67
Length=2655711
Score = 152 bits (168), Expect = 8e-35
Identities = 184/245 (75%), Gaps = 18/245 (7%)
Strand=Plus/Minus
Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71
||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1168252 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 1168193
Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG-CCAGCCACCAACCAT 130
||||| | || |||| ||||| ||||| ||||||| | | | |
Sbjct 1168192 -CTCAATC-TCGTGCGGCTAAAAGCCGCCTGTCCCCTTAAGAAGAATATTGTTCGCCGGT 1168135
Query 131 AG--TCGAT-------GGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
|| ||||| | | ||| ||| ||| | | ||||||||||| ||| |||||||
Sbjct 1168134 AGATTCGATACCAAACGCGTCTAGTTAATAGGCTGA-GTCTCGTTCGTCATCAGAATTAA 1168076
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||| ||||||||||||||||| ||| ||| || | ||||||||||
Sbjct 1168075 CCAGACAAATCGATCCACCAACTAAGAACG-----GCATCACTACAAACTGAATCAAGAA 1168021
Query 242 AGAGC 246
|||||
Sbjct 1168020 AGAGC 1168016
>seq33
Length=4916808
Score = 73.4 bits (80), Expect = 6e-11
Identities = 51/58 (88%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 73
|||||||||||||||||||| |||| | ||||||| |||| ||||||||||| | |||
Sbjct 3714747 TCAGTGTAGCGCGCGTGCGGACCAGGAAATCTAAGAGCATTACAGACCTGTTGTGGCC 3714804
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796789177962
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |