Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01]
1,402 sequences; 650,477,627 total letters
Query= AAMG01001178.1
Length=367
Score E
Sequences producing significant alignments: (Bits) Value
seq158 259 1e-66
seq89 214 4e-53
seq4 163 6e-38
seq48 143 6e-32
>seq158
Length=85213
Score = 259 bits (286), Expect = 1e-66
Identities = 223/276 (81%), Gaps = 14/276 (5%)
Strand=Plus/Minus
Query 60 CATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 119
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 49680 CATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTATCTCAGTTCCA 49621
Query 120 GTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTC 179
||||| ||||||||||||||||| ||| || |||| | |||||||| |||||||||||
Sbjct 49620 GTGTGGCTGATCATCCTCTCAGATCAGCTATAGATCATTGCCTTGGTAAGCCATTACCTT 49561
Query 180 ACCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCT 239
|||||||| |||||| | ||||||||||| ||| |||| || ||
Sbjct 49560 ACCAACTAACTAATCTAATATAGGCTCATCTAATA--GCAA-----TAA-------ATCT 49515
Query 240 TTCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCA 299
||| ||| |||| ||||| ||||||||| |||||||| | |||| || ||||| |
Sbjct 49514 TTCCCCCTTAGGGCGTATACGGTATTAGTTGCCGTTTCCAACAATTATTCCGTACTACTA 49455
Query 300 GGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335
|| ||||||||| ||||||||||||||| ||| ||
Sbjct 49454 GGTAGATTCCTATACATTACTCACCCGTCTGCCACT 49419
>seq89
Length=3091062
Score = 214 bits (236), Expect = 4e-53
Identities = 166/195 (85%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61
||||| | ||||| ||||| | ||| |||||||| ||| || |||||||||||||||
Sbjct 1197945 TTTACGAGCCGAAACCCTTCAT-CACTCACGCGGCGTTG-CTCCGTCAGGCTTTCGCCCA 1197888
Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121
||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1197887 TTGCGGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 1197828
Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181
||| | ||||| |||||||| | | |||| |||||||||||||| |||| |||||| ||
Sbjct 1197827 GTGGCCGATCACCCTCTCAGGTCGGCTACGTATCGTCGCCTTGGTAAGCCGTTACCTTAC 1197768
Query 182 CAACTAGCTAATCCG 196
|||||||||||| ||
Sbjct 1197767 CAACTAGCTAATACG 1197753
Score = 214 bits (236), Expect = 4e-53
Identities = 166/195 (85%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61
||||| | ||||| ||||| | ||| |||||||| ||| || |||||||||||||||
Sbjct 1472091 TTTACGAGCCGAAACCCTTCAT-CACTCACGCGGCGTTG-CTCCGTCAGGCTTTCGCCCA 1472034
Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121
||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1472033 TTGCGGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 1471974
Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181
||| | ||||| |||||||| | | |||| |||||||||||||| |||| |||||| ||
Sbjct 1471973 GTGGCCGATCACCCTCTCAGGTCGGCTACGTATCGTCGCCTTGGTAAGCCGTTACCTTAC 1471914
Query 182 CAACTAGCTAATCCG 196
|||||||||||| ||
Sbjct 1471913 CAACTAGCTAATACG 1471899
>seq4
Length=17479078
Score = 163 bits (180), Expect = 6e-38
Identities = 167/217 (77%), Gaps = 1/217 (0%)
Strand=Plus/Minus
Query 51 GCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTC 110
|||| ||||||| || |||||||| ||||||| |||||||||||||| | || ||| |||
Sbjct 12966655 GCTTGCGCCCATGGTGCAATATTCTCCACTGCCGCCTCCCGTAGGAGGCAGGGCCGAGTC 12966596
Query 111 TCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGC 170
|||| || ||||| |||||||||||||||||||| || |||||||| || |||| |
Sbjct 12966595 CCAGTCCCGGTGTGGCTGATCATCCTCTCAGACCAACTATAGATCGTCGACTACGTGAAC 12966536
Query 171 CATTACCTCACCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGG 230
|||||||| ||| ||||||||||| | | || ||||| || | | ||| | |||
Sbjct 12966535 CATTACCTTACCTACTAGCTAATCTCATATGGGTTCATCCGAAGGTGTGAGG-CAAAAGA 12966477
Query 231 TCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267
||||| |||| | | || |||||||||||||
Sbjct 12966476 TCCCCCACTTTGTTTCTCAGAGATTATGCGGTATTAG 12966440
>seq48
Length=4448091
Score = 143 bits (158), Expect = 6e-32
Identities = 95/103 (92%), Gaps = 2/103 (2%)
Strand=Plus/Plus
Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60
|||||||| || ||| ||||||| ||| || |||| || |||||||||||||||||||||
Sbjct 3382926 CTTTACAACCCAAAGGCCTTCTT-CACTCATGCGGTAT-GGCTGGATCAGGCTTTCGCCC 3382983
Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGA 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 3382984 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGA 3383026
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1071984970560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |