Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq199 232 2e-58 seq7 120 8e-25 >seq199 Length=31678 Score = 232 bits (256), Expect = 2e-58 Identities = 303/413 (73%), Gaps = 45/413 (11%) Strand=Plus/Minus Query 45 GGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCC 104 |||||| ||||||||| || ||||| ||||| ||| ||| ||| | |||||| | Sbjct 6350 GGTTCGATCCTCCAGTGTGTT-TTACCACACCTT-CAATCTGGTCAT-GACTAGATCACT 6294 Query 105 CGGTTTTCGGGTCTATTTCCCAGCGACTAGA-CGCCCTAGTAAGACTCGCTTTTCGCTAC 163 ||||| |||||||| | | | |||| | ||||||| | ||||||||||| ||||| Sbjct 6293 TGGTTT-CGGGTCTAATCCATAAA-ACTAAAACGCCCTATTCAGACTCGCTTT-CGCTAT 6237 Query 164 GCCTCC-CCTATTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAA 222 |||| | |||| | |||||||| | | | | ||| ||||||||||||||| |||| Sbjct 6236 GCCTACACCTAACGGCTTAAGCTTGCTCTAT-AGATTAACTCGCTGACCCATTATGCAAA 6178 Query 223 AGGTACGCAGTCAC-----------CCA---ACAAAGTGG-------------------- 248 |||||||| ||||| ||| ||||| | | Sbjct 6177 AGGTACGCTGTCACTCTAATGTAAACCAGCTACAAAATTGCTCTTATAGCAAAAACATAG 6118 Query 249 -GCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTT 307 ||||| |||| ||||| ||| || |||||| ||||||||||||||||| |||||||| Sbjct 6117 AGCTCCAACTGTTTGTAAGCACTCGATTTCAGATTCTATTTCACTCCCCTC-CCGGGGTT 6059 Query 308 CTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTT 367 |||||| |||||||||||||||||| |||||||||||||| | || ||||||||| ||| Sbjct 6058 CTTTTCACCTTTCCCTCACGGTACTTGTTCACTATCGGTCGCTAAGGAGTATTTAGGCTT 5999 Query 368 GGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 ||||||||||||||||||||||| ||| |||| |||| ||| ||||||| Sbjct 5998 GGAGGATGGTCCCCCCATATTCAAACAGGATTTCACGTGTCCCGCTCTACTCG 5946 >seq7 Length=14356694 Score = 120 bits (132), Expect = 8e-25 Identities = 111/138 (80%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 201 AGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCT 260 ||||||||||||||||||||||||||| |||||||| | | |||||||||||| Sbjct 3885667 AGTCGCTGACCCATTATACAAAAGGTATGCAGTCACATCCTTACGGATGCTCCCACTGCT 3885726 Query 261 TGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTC 320 ||| | | ||| ||||||| ||| | ||| || ||| | | |||||||||||||||||| Sbjct 3885727 AGTA-GTACACGTTTTCAGGTTCTCTGTCATTCGCCT-TGCTGGGTTCTTTTCGCCTTTC 3885784 Query 321 CCTCACGGTACTAGTTCA 338 ||||| ||||| ||||| Sbjct 3885785 CCTCATAGTACTGGTTCA 3885802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241582592768