Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01]
1,402 sequences; 650,477,627 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq199 232 2e-58
seq7 120 8e-25
>seq199
Length=31678
Score = 232 bits (256), Expect = 2e-58
Identities = 303/413 (73%), Gaps = 45/413 (11%)
Strand=Plus/Minus
Query 45 GGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCC 104
|||||| ||||||||| || ||||| ||||| ||| ||| ||| | |||||| |
Sbjct 6350 GGTTCGATCCTCCAGTGTGTT-TTACCACACCTT-CAATCTGGTCAT-GACTAGATCACT 6294
Query 105 CGGTTTTCGGGTCTATTTCCCAGCGACTAGA-CGCCCTAGTAAGACTCGCTTTTCGCTAC 163
||||| |||||||| | | | |||| | ||||||| | ||||||||||| |||||
Sbjct 6293 TGGTTT-CGGGTCTAATCCATAAA-ACTAAAACGCCCTATTCAGACTCGCTTT-CGCTAT 6237
Query 164 GCCTCC-CCTATTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAA 222
|||| | |||| | |||||||| | | | | ||| ||||||||||||||| ||||
Sbjct 6236 GCCTACACCTAACGGCTTAAGCTTGCTCTAT-AGATTAACTCGCTGACCCATTATGCAAA 6178
Query 223 AGGTACGCAGTCAC-----------CCA---ACAAAGTGG-------------------- 248
|||||||| ||||| ||| ||||| | |
Sbjct 6177 AGGTACGCTGTCACTCTAATGTAAACCAGCTACAAAATTGCTCTTATAGCAAAAACATAG 6118
Query 249 -GCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTT 307
||||| |||| ||||| ||| || |||||| ||||||||||||||||| ||||||||
Sbjct 6117 AGCTCCAACTGTTTGTAAGCACTCGATTTCAGATTCTATTTCACTCCCCTC-CCGGGGTT 6059
Query 308 CTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTT 367
|||||| |||||||||||||||||| |||||||||||||| | || ||||||||| |||
Sbjct 6058 CTTTTCACCTTTCCCTCACGGTACTTGTTCACTATCGGTCGCTAAGGAGTATTTAGGCTT 5999
Query 368 GGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420
||||||||||||||||||||||| ||| |||| |||| ||| |||||||
Sbjct 5998 GGAGGATGGTCCCCCCATATTCAAACAGGATTTCACGTGTCCCGCTCTACTCG 5946
>seq7
Length=14356694
Score = 120 bits (132), Expect = 8e-25
Identities = 111/138 (80%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 201 AGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCT 260
||||||||||||||||||||||||||| |||||||| | | ||||||||||||
Sbjct 3885667 AGTCGCTGACCCATTATACAAAAGGTATGCAGTCACATCCTTACGGATGCTCCCACTGCT 3885726
Query 261 TGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTC 320
||| | | ||| ||||||| ||| | ||| || ||| | | ||||||||||||||||||
Sbjct 3885727 AGTA-GTACACGTTTTCAGGTTCTCTGTCATTCGCCT-TGCTGGGTTCTTTTCGCCTTTC 3885784
Query 321 CCTCACGGTACTAGTTCA 338
||||| ||||| |||||
Sbjct 3885785 CCTCATAGTACTGGTTCA 3885802
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1241582592768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |