Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq27 91.5 9e-17 seq1 89.7 3e-16 seq21 87.8 1e-15 seq113 82.4 5e-14 seq67 82.4 5e-14 >seq27 Length=6825462 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| |||||||||| Sbjct 454314 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 454370 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||||| |||| Sbjct 454371 GGCAGGGACGTAAT-CAACGCGAGCT 454395 >seq1 Length=33720124 Score = 89.7 bits (98), Expect = 3e-16 Identities = 74/85 (87%), Gaps = 4/85 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| |||||||||| Sbjct 17880939 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 17880883 Query 99 GGCAGGGACGTAATACAACGCAAGC 123 |||||||||||||| |||||| ||| Sbjct 17880882 GGCAGGGACGTAAT-CAACGCGAGC 17880859 >seq21 Length=9672676 Score = 87.8 bits (96), Expect = 1e-15 Identities = 74/86 (86%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| |||||| ||||||||||||||| Sbjct 7172518 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGCGCGGGGTGTACAAAG 7172574 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 ||||||||| |||| |||||| |||| Sbjct 7172575 GGCAGGGACATAAT-CAACGCGAGCT 7172599 >seq113 Length=742160 Score = 82.4 bits (90), Expect = 5e-14 Identities = 73/86 (85%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || |||||| || ||||||||||| |||||||||| Sbjct 143689 TCCGAA-GACCTCACTAAATCATT-CAATCGGTATTA-GCGACGGGCGGTGTGTACAAAG 143633 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 || ||||||||||| |||||| |||| Sbjct 143632 GGTAGGGACGTAAT-CAACGCGAGCT 143608 >seq67 Length=2655711 Score = 82.4 bits (90), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||| | ||||||||||| ||||||||||||| |||||| Sbjct 1168447 CTCACTAAATCATT-CAATCGGTAGCA-GCGACGGGCGGTGTGTACAAAGGGCGGGGACG 1168390 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 1168389 TAAT-CAACGCGAGCT 1168375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300796046360