Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01]
1,402 sequences; 650,477,627 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq27 91.5 9e-17
seq1 89.7 3e-16
seq21 87.8 1e-15
seq113 82.4 5e-14
seq67 82.4 5e-14
>seq27
Length=6825462
Score = 91.5 bits (100), Expect = 9e-17
Identities = 75/86 (87%), Gaps = 4/86 (5%)
Strand=Plus/Plus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||||| |||| || ||||||||| ||||||||||| ||||||||||
Sbjct 454314 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 454370
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| |||||| ||||
Sbjct 454371 GGCAGGGACGTAAT-CAACGCGAGCT 454395
>seq1
Length=33720124
Score = 89.7 bits (98), Expect = 3e-16
Identities = 74/85 (87%), Gaps = 4/85 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||||| |||| || ||||||||| ||||||||||| ||||||||||
Sbjct 17880939 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 17880883
Query 99 GGCAGGGACGTAATACAACGCAAGC 123
|||||||||||||| |||||| |||
Sbjct 17880882 GGCAGGGACGTAAT-CAACGCGAGC 17880859
>seq21
Length=9672676
Score = 87.8 bits (96), Expect = 1e-15
Identities = 74/86 (86%), Gaps = 4/86 (5%)
Strand=Plus/Plus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||||| |||| || ||||||||| |||||| |||||||||||||||
Sbjct 7172518 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGCGCGGGGTGTACAAAG 7172574
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
||||||||| |||| |||||| ||||
Sbjct 7172575 GGCAGGGACATAAT-CAACGCGAGCT 7172599
>seq113
Length=742160
Score = 82.4 bits (90), Expect = 5e-14
Identities = 73/86 (85%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||||| |||| || |||||| || ||||||||||| ||||||||||
Sbjct 143689 TCCGAA-GACCTCACTAAATCATT-CAATCGGTATTA-GCGACGGGCGGTGTGTACAAAG 143633
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|| ||||||||||| |||||| ||||
Sbjct 143632 GGTAGGGACGTAAT-CAACGCGAGCT 143608
>seq67
Length=2655711
Score = 82.4 bits (90), Expect = 5e-14
Identities = 66/76 (87%), Gaps = 3/76 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||| | ||||||||||| ||||||||||||| ||||||
Sbjct 1168447 CTCACTAAATCATT-CAATCGGTAGCA-GCGACGGGCGGTGTGTACAAAGGGCGGGGACG 1168390
Query 109 TAATACAACGCAAGCT 124
|||| |||||| ||||
Sbjct 1168389 TAAT-CAACGCGAGCT 1168375
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300796046360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |