Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01]
1,402 sequences; 650,477,627 total letters
Query= AAMG01001432.1
Length=344
Score E
Sequences producing significant alignments: (Bits) Value
seq89 224 2e-56
seq158 154 3e-35
seq4 122 2e-25
seq48 89.7 1e-15
>seq89
Length=3091062
Score = 224 bits (248), Expect = 2e-56
Identities = 238/313 (76%), Gaps = 8/313 (3%)
Strand=Plus/Minus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||||| ||| | ||||| |||| ||||||| | || || ||| |||||||||||||||||
Sbjct 1197914 GGCGTTGCTCCGTCAGGCTTTCGCCCATTGCGGAAGATTCCCTACTGCTGCCTCCCGTAG 1197855
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
|||||||| |||||||||||| ||| |||||||| ||| |||||||| ||||||| ||
Sbjct 1197854 GAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCCGATCACCCTCTCAGGTCGGCTACGTAT 1197795
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180
||||| |||||| || ||| || |||||||| ||||| | |||| | |||||| | |
Sbjct 1197794 CGTCGCCTTGGTAAGCCGTTACCTTACCAACTAGCTAATACGGCGCGGGTCCATCTATAA 1197735
Query 181 GCGATA-------AATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATT 233
| |||| |||||| |||| |||| | | | | |||| |||||||
Sbjct 1197734 GTGATAGCAAAACCATCTTTCACTTTAGAACCATGCGGTTC-CAAATGTTATCCGGTATT 1197676
Query 234 AGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACC 293
||| |||||| | ||||| ||| ||| | ||| ||||| | |||||||||||||||
Sbjct 1197675 AGCTCCGGTTTCCCGAAGTTATCCCAGTCTTATAGGTAGGTTACCCACGTGTTACTCACC 1197616
Query 294 CGTCCGCCACTAA 306
|||||||| ||||
Sbjct 1197615 CGTCCGCCGCTAA 1197603
Score = 224 bits (248), Expect = 2e-56
Identities = 238/313 (76%), Gaps = 8/313 (3%)
Strand=Plus/Minus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||||| ||| | ||||| |||| ||||||| | || || ||| |||||||||||||||||
Sbjct 1472060 GGCGTTGCTCCGTCAGGCTTTCGCCCATTGCGGAAGATTCCCTACTGCTGCCTCCCGTAG 1472001
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
|||||||| |||||||||||| ||| |||||||| ||| |||||||| ||||||| ||
Sbjct 1472000 GAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCCGATCACCCTCTCAGGTCGGCTACGTAT 1471941
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180
||||| |||||| || ||| || |||||||| ||||| | |||| | |||||| | |
Sbjct 1471940 CGTCGCCTTGGTAAGCCGTTACCTTACCAACTAGCTAATACGGCGCGGGTCCATCTATAA 1471881
Query 181 GCGATA-------AATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATT 233
| |||| |||||| |||| |||| | | | | |||| |||||||
Sbjct 1471880 GTGATAGCAAAACCATCTTTCACTTTAGAACCATGCGGTTC-CAAATGTTATCCGGTATT 1471822
Query 234 AGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACC 293
||| |||||| | ||||| ||| ||| | ||| ||||| | |||||||||||||||
Sbjct 1471821 AGCTCCGGTTTCCCGAAGTTATCCCAGTCTTATAGGTAGGTTACCCACGTGTTACTCACC 1471762
Query 294 CGTCCGCCACTAA 306
|||||||| ||||
Sbjct 1471761 CGTCCGCCGCTAA 1471749
>seq158
Length=85213
Score = 154 bits (170), Expect = 3e-35
Identities = 227/320 (71%), Gaps = 21/320 (7%)
Strand=Plus/Minus
Query 26 CATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCA 85
|||||| |||||| ||||||||||||||||||||||||||||| |||| ||||||| |||
Sbjct 49680 CATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTATCTCAGTTCCA 49621
Query 86 ATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATCTC 145
|||||| | ||| |||||||| | |||| |||| | | |||||| || |||| ||
Sbjct 49620 GTGTGGCTGATCATCCTCTCAGATCAGCTATAGATCATTGCCTTGGTAAGCCATTACCTT 49561
Query 146 ACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATAAATCTTTGGTCAAAGAATG 205
|||||||| |||||| || ||||| ||| ||||||||||
Sbjct 49560 ACCAACTAACTAATCTAATATAGGCTCATCTAATAGCAATAAATCTTT------------ 49513
Query 206 ATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCCAAACGTTATTCCACTCTGA 265
| ||| | ||| ||||||||| ||||||||| ||||||| ||
Sbjct 49512 ----CCCCCTTAGGGCGTATACGGTATTAGTTGCCGTTTCCAACAATTATTCCGTACTAC 49457
Query 266 AAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACTAAGCTATA-TATCCAGCAAGC 324
||| || || || | ||||||||||||| ||||||||| |||| || |||||||
Sbjct 49456 TAGGTAGATTCCT-ATACATTACTCACCCGTCTGCCACTAAGTTATACCAT--AGCAAGC 49400
Query 325 TTTCAACATAGCTCCGTTCG 344
| ||| ||| | |||||||
Sbjct 49399 -TACAATATAACCCCGTTCG 49381
>seq4
Length=17479078
Score = 122 bits (134), Expect = 2e-25
Identities = 109/137 (80%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 24 CCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCC 83
||||| ||||||||| | ||||||| |||||||||||||| | |||||| ||| ||||||
Sbjct 12966648 CCCATGGTGCAATATTCTCCACTGCCGCCTCCCGTAGGAGGCAGGGCCGAGTCCCAGTCC 12966589
Query 84 CAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATC 143
| |||||| | ||| |||||||| || ||| |||||||| || ||| | |||| |
Sbjct 12966588 CGGTGTGGCTGATCATCCTCTCAGACCAACTATAGATCGTCGACTACGTGAACCATTACC 12966529
Query 144 TCACCAACTACCTAATC 160
| ||| |||| ||||||
Sbjct 12966528 TTACCTACTAGCTAATC 12966512
>seq48
Length=4448091
Score = 89.7 bits (98), Expect = 1e-15
Identities = 57/62 (92%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66
|||| |||||| |||| |||||||| |||||| |||||||||||||||||||||||||||
Sbjct 3382964 GCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCT 3383023
Query 67 GG 68
||
Sbjct 3383024 GG 3383025
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 998386002432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |