Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq89 224 2e-56 seq158 154 3e-35 seq4 122 2e-25 seq48 89.7 1e-15 >seq89 Length=3091062 Score = 224 bits (248), Expect = 2e-56 Identities = 238/313 (76%), Gaps = 8/313 (3%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||||| ||| | ||||| |||| ||||||| | || || ||| ||||||||||||||||| Sbjct 1197914 GGCGTTGCTCCGTCAGGCTTTCGCCCATTGCGGAAGATTCCCTACTGCTGCCTCCCGTAG 1197855 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||| |||||||||||| ||| |||||||| ||| |||||||| ||||||| || Sbjct 1197854 GAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCCGATCACCCTCTCAGGTCGGCTACGTAT 1197795 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| |||||| || ||| || |||||||| ||||| | |||| | |||||| | | Sbjct 1197794 CGTCGCCTTGGTAAGCCGTTACCTTACCAACTAGCTAATACGGCGCGGGTCCATCTATAA 1197735 Query 181 GCGATA-------AATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATT 233 | |||| |||||| |||| |||| | | | | |||| ||||||| Sbjct 1197734 GTGATAGCAAAACCATCTTTCACTTTAGAACCATGCGGTTC-CAAATGTTATCCGGTATT 1197676 Query 234 AGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACC 293 ||| |||||| | ||||| ||| ||| | ||| ||||| | ||||||||||||||| Sbjct 1197675 AGCTCCGGTTTCCCGAAGTTATCCCAGTCTTATAGGTAGGTTACCCACGTGTTACTCACC 1197616 Query 294 CGTCCGCCACTAA 306 |||||||| |||| Sbjct 1197615 CGTCCGCCGCTAA 1197603 Score = 224 bits (248), Expect = 2e-56 Identities = 238/313 (76%), Gaps = 8/313 (3%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||||| ||| | ||||| |||| ||||||| | || || ||| ||||||||||||||||| Sbjct 1472060 GGCGTTGCTCCGTCAGGCTTTCGCCCATTGCGGAAGATTCCCTACTGCTGCCTCCCGTAG 1472001 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||| |||||||||||| ||| |||||||| ||| |||||||| ||||||| || Sbjct 1472000 GAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCCGATCACCCTCTCAGGTCGGCTACGTAT 1471941 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| |||||| || ||| || |||||||| ||||| | |||| | |||||| | | Sbjct 1471940 CGTCGCCTTGGTAAGCCGTTACCTTACCAACTAGCTAATACGGCGCGGGTCCATCTATAA 1471881 Query 181 GCGATA-------AATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATT 233 | |||| |||||| |||| |||| | | | | |||| ||||||| Sbjct 1471880 GTGATAGCAAAACCATCTTTCACTTTAGAACCATGCGGTTC-CAAATGTTATCCGGTATT 1471822 Query 234 AGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACC 293 ||| |||||| | ||||| ||| ||| | ||| ||||| | ||||||||||||||| Sbjct 1471821 AGCTCCGGTTTCCCGAAGTTATCCCAGTCTTATAGGTAGGTTACCCACGTGTTACTCACC 1471762 Query 294 CGTCCGCCACTAA 306 |||||||| |||| Sbjct 1471761 CGTCCGCCGCTAA 1471749 >seq158 Length=85213 Score = 154 bits (170), Expect = 3e-35 Identities = 227/320 (71%), Gaps = 21/320 (7%) Strand=Plus/Minus Query 26 CATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCA 85 |||||| |||||| ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct 49680 CATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTATCTCAGTTCCA 49621 Query 86 ATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATCTC 145 |||||| | ||| |||||||| | |||| |||| | | |||||| || |||| || Sbjct 49620 GTGTGGCTGATCATCCTCTCAGATCAGCTATAGATCATTGCCTTGGTAAGCCATTACCTT 49561 Query 146 ACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATAAATCTTTGGTCAAAGAATG 205 |||||||| |||||| || ||||| ||| |||||||||| Sbjct 49560 ACCAACTAACTAATCTAATATAGGCTCATCTAATAGCAATAAATCTTT------------ 49513 Query 206 ATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCCAAACGTTATTCCACTCTGA 265 | ||| | ||| ||||||||| ||||||||| ||||||| || Sbjct 49512 ----CCCCCTTAGGGCGTATACGGTATTAGTTGCCGTTTCCAACAATTATTCCGTACTAC 49457 Query 266 AAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACTAAGCTATA-TATCCAGCAAGC 324 ||| || || || | ||||||||||||| ||||||||| |||| || ||||||| Sbjct 49456 TAGGTAGATTCCT-ATACATTACTCACCCGTCTGCCACTAAGTTATACCAT--AGCAAGC 49400 Query 325 TTTCAACATAGCTCCGTTCG 344 | ||| ||| | ||||||| Sbjct 49399 -TACAATATAACCCCGTTCG 49381 >seq4 Length=17479078 Score = 122 bits (134), Expect = 2e-25 Identities = 109/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 24 CCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCC 83 ||||| ||||||||| | ||||||| |||||||||||||| | |||||| ||| |||||| Sbjct 12966648 CCCATGGTGCAATATTCTCCACTGCCGCCTCCCGTAGGAGGCAGGGCCGAGTCCCAGTCC 12966589 Query 84 CAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATC 143 | |||||| | ||| |||||||| || ||| |||||||| || ||| | |||| | Sbjct 12966588 CGGTGTGGCTGATCATCCTCTCAGACCAACTATAGATCGTCGACTACGTGAACCATTACC 12966529 Query 144 TCACCAACTACCTAATC 160 | ||| |||| |||||| Sbjct 12966528 TTACCTACTAGCTAATC 12966512 >seq48 Length=4448091 Score = 89.7 bits (98), Expect = 1e-15 Identities = 57/62 (92%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||||| |||| |||||||| |||||| ||||||||||||||||||||||||||| Sbjct 3382964 GCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCT 3383023 Query 67 GG 68 || Sbjct 3383024 GG 3383025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998386002432