Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq199 154 3e-35 seq13 127 5e-27 >seq199 Length=31678 Score = 154 bits (170), Expect = 3e-35 Identities = 289/418 (69%), Gaps = 24/418 (6%) Strand=Plus/Minus Query 1 CGACTACGCCTGT-CGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGAC 59 ||||||| ||| | ||| |||||||||||| |||||| |||| ||||| ||||| || Sbjct 7002 CGACTACTCCTTTACGGACTCGCCTTAGGAACCGACTAACCCTACGCAGATTAACTTAAC 6943 Query 60 CCTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCG-TCACACGCTACTCATGCC 118 ||||||||| ||| | || | | | || ||| | | |||||||| ||| | Sbjct 6942 GTAGGAACCCTTAGATTTTTGGTGAGAGTGTTTTTCACACTCTTTTACGCTACTTATGTC 6883 Query 119 TGCATTCTCACT-CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACC-ACTGACA 176 ||||||||||| | || | ||||| || |||| | |||||| ||| ||| Sbjct 6882 AGCATTCTCACTTCTGAT-ATCTCCAGCAGTTT-TCACAAACTACCTTCACAGACTTACA 6825 Query 177 CGACGCTCCCCTACCCAACC----------ACACAGGTTGC---CACAGCTTCGGCGGAT 223 ||||||| ||||| ||| | || || |||| |||||| | Sbjct 6824 GAACGCTCCGCTACCGCACCTATTGATCGGAATCAATAAGCACTCACATCTTCGGTATAC 6765 Query 224 AACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTT-----GACCAGTGAGCTATTAC 278 | ||| ||||||| |||||| || |||| ||| |||| ||| |||||||| |||| Sbjct 6764 AGCTTTAGCCCCGGTACATTTTCAGCGCAGAAAAACTTATTTAGACAAGTGAGCTGTTAC 6705 Query 279 GCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACA 338 || ||||| ||||||||||||||||||||||||||||| | ||| | || || Sbjct 6704 GCTTTCTTTAAAGGATGGCTGCTTCCAAGCCAACCTCCTAGCTGTAATGGTTTTTCTACT 6645 Query 339 TCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCT 396 ||||| |||||| || | || ||| |||||| | ||||||||| ||||||||| Sbjct 6644 TCCTTCCCCACTTAGCTGTAATTTTGGGACCTTAGATAGTGATCTGGGTTGTTTCCCT 6587 >seq13 Length=9188118 Score = 127 bits (140), Expect = 5e-27 Identities = 223/317 (70%), Gaps = 11/317 (3%) Strand=Plus/Plus Query 17 CCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACCCTGGAACCCTTGGATA 76 |||||| |||| ||||| |||| | | || ||| | | ||||||||||| | Sbjct 7321847 CCTCGCTCTAGGGGTCGACTTACCCTGCCCCGATTAACGTTGGACAGGAACCCTTGGTTT 7321906 Query 77 ATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCTGCATTCTCACT-CGCA 134 |||||| |||| || |||| | || || | ||| | |||||| |||| | || Sbjct 7321907 TTCGGCGAGCGGGTTTTTTACCCACTTTATCGTTAATTATGTCAGCATTCGCACTTCTCA 7321966 Query 135 TCAACTCCACCACACAGTCACCCGGCAGCTTC-ACCACTGACACGACGCTCCCCTACCCA 193 | | ||||| || || || | || |||| || || ||| |||||| ||| |||| Sbjct 7321967 T-ACCTCCAGCAGACC-TCTCAGTCCACCTTCGACTGCTTACAGAACGCTCTCCTCCCCA 7322024 Query 194 ACCACACAGGT-----TGCCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGG 248 | ||| | | |||| ||||||||| | || ||| ||||||| |||||| || | Sbjct 7322025 ATAACATTGCTGTTGCTGCCGCAGCTTCGGTGCATG-CTTTAGCCCCGTTACATTTTCCG 7322083 Query 249 CGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGC 308 ||| | ||| |||||||| |||||||||| ||||| || |||||||||||| |||| Sbjct 7322084 CGCAGGCCGACTCGACCAGTGTGCTATTACGCTTTCTTTAAATGATGGCTGCTTCTAAGC 7322143 Query 309 CAACCTCCTGGTTGTCT 325 |||| |||||| ||||| Sbjct 7322144 CAACATCCTGGCTGTCT 7322160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177583490048