Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq89 293 4e-77 seq48 185 1e-44 seq158 96.9 6e-18 >seq89 Length=3091062 Score = 293 bits (324), Expect = 4e-77 Identities = 234/279 (84%), Gaps = 2/279 (1%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| | |||||||||||||| | |||| || |||||||||||||||||| Sbjct 1472434 CCCACGCTTTCGCACATCAGCGTCAGTTACAGACCAGAAAGTCGCCTTCGCCACTGGTGT 1472375 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| ||| ||| ||||||||||||||||||| |||||||| || ||||| | |||| Sbjct 1472374 TCCTCCATATCTCTGCGCATTTCACCGCTACACATGGAATTCCACTTTCCTCTTCTGCAC 1472315 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATG-GGTTGAGCCCATAGTTTTCACATCTGAC 179 ||||| ||||||| |||| | || ||||||||| | ||||||||| ||| Sbjct 1472314 TCAAGTTTCCCAGTTTCCAATG-ACCCTCCACGGTTGAGCCGTGGGCTTTCACATCAGAC 1472256 Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239 || |||||||| ||| |||||| |||||||| ||||||||||||||||||||||| Sbjct 1472255 TTAAGAAACCGCCTACGCGCGCTTTACGCCCAATAATTCCGGATAACGCTTGCCACCTAC 1472196 Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||||||||||||||||||||||||||||||||||||||| Sbjct 1472195 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 1472157 Score = 147 bits (162), Expect = 4e-33 Identities = 87/91 (96%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 |||||||| ||| |||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct 1198101 CCGCCTACGCGCGCTTTACGCCCAATAATTCCGGATAACGCTTGCCACCTACGTATTACC 1198042 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||||||||||||||||||||||||||||||| Sbjct 1198041 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 1198011 >seq48 Length=4448091 Score = 185 bits (204), Expect = 1e-44 Identities = 209/280 (75%), Gaps = 0/280 (0%) Strand=Plus/Plus Query 3 CACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTC 62 ||||| |||||||||||||||||| | |||| | |||||||||||||||||||| Sbjct 3382611 CACGCCTTCGCGCCTCAGCGTCAGATTTGAACCAGATAGACGCCTTCGCCACTGGTGTTC 3382670 Query 63 CTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTC 122 |||| |||| |||| |||||||| |||||| |||||||| | ||||| ||| Sbjct 3382671 CTCCTAATATTTACGAATTTCACCTCTACACTAGGAATTCCTCTATCCTCTTTCAATCTC 3382730 Query 123 AAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTG 182 || | |||||| ||| ||| ||||||| | |||||| | | |||| Sbjct 3382731 TAGGTTAGCAGTTTTAAAAGCAATTCCAAAGTTGAGCTTTGGGATTTCACTTTTAACTTA 3382790 Query 183 CCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTA 242 | || |||||| ||| |||||| |||||||| |||| |||||||| ||| || |||| Sbjct 3382791 CTAACCAGCCTACGCGCTCTTTACGCCCAATAATTCCGAATAACGCTAGCCCTCTCCGTA 3382850 Query 243 TTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 |||||||||||||||||||| |||||||| | ||| ||| Sbjct 3382851 TTACCGCGGCTGCTGGCACGGAGTTAGCCAGGACTTCTTC 3382890 >seq158 Length=85213 Score = 96.9 bits (106), Expect = 6e-18 Identities = 77/93 (83%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||| |||||||||||||||||| | |||| | |||||||||||||||||| Sbjct 25693 CCCACGCCTTCGCGCCTCAGCGTCAGATTTGAACCAGATAGACGCCTTCGCCACTGGTGT 25634 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACAC 93 |||||| |||| |||| |||||||| |||||| Sbjct 25633 TCCTCCTAATATTTACGAATTTCACCTCTACAC 25601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828788743342