Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq128 158 1e-36 seq41 75.2 1e-11 seq26 73.4 4e-11 >seq128 Length=163306 Score = 158 bits (174), Expect = 1e-36 Identities = 92/95 (97%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct 65663 GGAACCAGGACTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 65604 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTT 95 ||||| ||||||||||||||||||||||||||||| Sbjct 65603 CATTAGCATGGAATAATAGAATAGGACGTGCGGTT 65569 >seq41 Length=5183572 Score = 75.2 bits (82), Expect = 1e-11 Identities = 129/184 (70%), Gaps = 9/184 (5%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC------CTTTGCTCGAATACAT 63 || ||||| ||||| ||||||||| | | ||||||||| || ||| |||||| Sbjct 1921044 ACGTTTACATTGAACAAATTAGAGTGCTTAAAGCAGGCAAAAATCTCTGCCAGAATACTG 1921103 Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG 123 ||||||||||| ||| ||||| | |||||||||| || ||| || ||| | | | Sbjct 1921104 GTGCATGGAATAATGGAACAGGACCT-TGGTTCTATTTCGTTGGTCTC-CGGAACACAAG 1921161 Query 124 -TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 ||||||| ||| || || |||| | | ||||| || | ||||||||||| Sbjct 1921162 ATAATGATCAATGTGGCCAGGCGGGAGAATTCGTATTGCGACGTTAGGTGTGAAATTCTT 1921221 Query 183 GGAT 186 |||| Sbjct 1921222 GGAT 1921225 >seq26 Length=6747920 Score = 73.4 bits (80), Expect = 4e-11 Identities = 123/177 (69%), Gaps = 7/177 (4%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC------CTTTGCTCGAATACAT 63 || ||||||||||| ||||||||| | | ||||||||| | ||| ||||| Sbjct 5493893 ACGTTTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCAAAAATATCTGCCAGAATAGTG 5493952 Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG 123 ||||||||||| ||| ||||| | ||||||||| ||| || || | || | Sbjct 5493953 GTGCATGGAATAATGGAACAGGACCT-TGGTTCTATTCTGTTAGTCTCCGGAACACAAGG 5494011 Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 ||||||| ||| ||| || |||||| | ||||| || | ||||||||||| Sbjct 5494012 TAATGATCAATGTGGACAGGCGGGGGCATTCGTATTGCGGCGTTAGAGGTGAAATTC 5494068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511993046080