Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01]
1,402 sequences; 650,477,627 total letters
Query= AAMG01002180.1
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
seq89 421 2e-115
seq48 264 3e-68
seq158 181 3e-43
seq4 129 2e-27
>seq89
Length=3091062
Score = 421 bits (466), Expect = 2e-115
Identities = 401/512 (78%), Gaps = 38/512 (7%)
Strand=Plus/Plus
Query 23 AGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACATACCG 82
||||||||||||||||||||| |||||||||||| || | || ||||||| | |
Sbjct 1471751 AGCGGCGGACGGGTGAGTAACACGTGGGTAACCTACCTATAAGACTGGGATAACTTCGGG 1471810
Query 83 AAAGGTATGCTAATACGAGATAATATACTTTTATCGCATGGTAGAAGTATCAAAGCTCCG 142
||| |||||||| ||||| || | | |||||||| | | |||| | |
Sbjct 1471811 AAACCGGAGCTAATACCGGATAACATT-TGGAACCGCATGGTTCTAAAGTGAAAGAT--G 1471867
Query 143 GC---GGTA-CAG-----GATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCT 193
| | || || ||| |||||||| | ||||||||||||||||||||||||||
Sbjct 1471868 GTTTTGCTATCACTTATAGATGGACCCGCGCCGTATTAGCTAGTTGGTAAGGTAACGGCT 1471927
Query 194 TACCAAGGCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGAC 253
||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1471928 TACCAAGGCGACGATACGTAGCCGACCTGAGAGGGTGATCGGCCACACTGGAACTGAGAC 1471987
Query 254 ACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTG 313
|||||||| ||||||||||||||||||||| |||||| || | |||||||| ||||||||
Sbjct 1471988 ACGGTCCAGACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCGCAATGGGCGAAAGCCTG 1472047
Query 314 ATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGA 373
| | |||||||||||||||| |||||||| ||||| ||||||| |||||| | | |||
Sbjct 1472048 ACGGAGCAACGCCGCGTGAGTGATGAAGGGTTTCGGCTCGTAAAACTCTGTTATTAGGGA 1472107
Query 374 AGA---------TAA----------------TGACGGTACTTGAGGAGGAAGCCCCGGCT 408
||| ||| ||||||||| | | || ||||| |||||
Sbjct 1472108 AGAACAAATGTGTAAGTAACTGTGCACATCTTGACGGTACCTAATCAGAAAGCCACGGCT 1472167
Query 409 AACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGG 468
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| | ||
Sbjct 1472168 AACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTATCCGGAATTA-TTGG 1472226
Query 469 GCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500
|||||||| | ||||||| |||||||||||||
Sbjct 1472227 GCGTAAAGCGCGCGTAGGCGGTTTCTTAAGTC 1472258
Score = 416 bits (460), Expect = 8e-114
Identities = 398/509 (78%), Gaps = 38/509 (7%)
Strand=Plus/Plus
Query 23 AGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACATACCG 82
||||||||||||||||||||| |||||||||||| || | || ||||||| | |
Sbjct 1197605 AGCGGCGGACGGGTGAGTAACACGTGGGTAACCTACCTATAAGACTGGGATAACTTCGGG 1197664
Query 83 AAAGGTATGCTAATACGAGATAATATACTTTTATCGCATGGTAGAAGTATCAAAGCTCCG 142
||| |||||||| ||||| || | | |||||||| | | |||| | |
Sbjct 1197665 AAACCGGAGCTAATACCGGATAACATT-TGGAACCGCATGGTTCTAAAGTGAAAGAT--G 1197721
Query 143 GC---GGTA-CAG-----GATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCT 193
| | || || ||| |||||||| | ||||||||||||||||||||||||||
Sbjct 1197722 GTTTTGCTATCACTTATAGATGGACCCGCGCCGTATTAGCTAGTTGGTAAGGTAACGGCT 1197781
Query 194 TACCAAGGCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGAC 253
||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1197782 TACCAAGGCGACGATACGTAGCCGACCTGAGAGGGTGATCGGCCACACTGGAACTGAGAC 1197841
Query 254 ACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTG 313
|||||||| ||||||||||||||||||||| |||||| || | |||||||| ||||||||
Sbjct 1197842 ACGGTCCAGACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCGCAATGGGCGAAAGCCTG 1197901
Query 314 ATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGA 373
| | |||||||||||||||| |||||||| ||||| ||||||| |||||| | | |||
Sbjct 1197902 ACGGAGCAACGCCGCGTGAGTGATGAAGGGTTTCGGCTCGTAAAACTCTGTTATTAGGGA 1197961
Query 374 AGA---------TAA----------------TGACGGTACTTGAGGAGGAAGCCCCGGCT 408
||| ||| ||||||||| | | || ||||| |||||
Sbjct 1197962 AGAACAAATGTGTAAGTAACTGTGCACATCTTGACGGTACCTAATCAGAAAGCCACGGCT 1198021
Query 409 AACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGG 468
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| | ||
Sbjct 1198022 AACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTATCCGGAATTA-TTGG 1198080
Query 469 GCGTAAAGGGTGCGTAGGTGGTTTCTTAA 497
|||||||| | ||||||| ||||||||||
Sbjct 1198081 GCGTAAAGCGCGCGTAGGCGGTTTCTTAA 1198109
>seq48
Length=4448091
Score = 264 bits (292), Expect = 3e-68
Identities = 201/235 (86%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 258 TCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGC 317
|||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||| |
Sbjct 3383026 TCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATCC 3382967
Query 318 AGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGAT 377
||| | |||| |||| || ||||||||| |||| |||||||||| || ||||||||
Sbjct 3382966 AGCCATACCGCATGAGTGAAGAAGGCCTTTGGGTTGTAAAGCTCTTTCGGTGAGGAAGAT 3382907
Query 378 AATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACG 437
| |||||||||| || |||| || |||||||| ||||||||||||||||||||||||
Sbjct 3382906 AGTGACGGTACTCACAGAAGAAGTCCTGGCTAACTCCGTGCCAGCAGCCGCGGTAATACG 3382847
Query 438 TAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGG-TGGTT 491
|| ||||||||||||| |||||||| | |||||||||| | ||||||| |||||
Sbjct 3382846 GAGAGGGCTAGCGTTATTCGGAATTA-TTGGGCGTAAAGAGCGCGTAGGCTGGTT 3382793
>seq158
Length=85213
Score = 181 bits (200), Expect = 3e-43
Identities = 121/135 (90%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226
|||||| ||||||||||||||| ||||||||||||| | |||| |||| || |||||||
Sbjct 49546 GATTAGTTAGTTGGTAAGGTAATGGCTTACCAAGGCAATGATCTATAGCTGATCTGAGAG 49605
Query 227 GGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGG 286
| ||||| |||||| ||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 49606 GATGATCAGCCACACTGGAACTGAGATACGGTCCAGACTCCTACGGGAGGCAGCAGTGGG 49665
Query 287 GAATATTGCACAATG 301
|||||||| ||||||
Sbjct 49666 GAATATTGGACAATG 49680
>seq4
Length=17479078
Score = 129 bits (142), Expect = 2e-27
Identities = 115/144 (80%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226
||||||||||| |||||||||| || | || || |||||||| ||| | |||||||
Sbjct 12966512 GATTAGCTAGTAGGTAAGGTAATGGTTCACGTAGTCGACGATCTATAGTTGGTCTGAGAG 12966571
Query 227 GGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGG 286
| ||||| |||||| || |||| ||| ||| || |||||||||||||| |||||||
Sbjct 12966572 GATGATCAGCCACACCGGGACTGGGACTCGGCCCTGCCTCCTACGGGAGGCGGCAGTGGA 12966631
Query 287 GAATATTGCACAATGGGCAAAAGC 310
||||||||||| |||||| ||||
Sbjct 12966632 GAATATTGCACCATGGGCGCAAGC 12966655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1497579003648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |