Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq89 417 2e-114 seq48 253 5e-65 seq158 192 1e-46 >seq89 Length=3091062 Score = 417 bits (462), Expect = 2e-114 Identities = 332/399 (83%), Gaps = 0/399 (0%) Strand=Plus/Plus Query 10 AGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTAT 69 || ||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct 1472154 AGAAAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTAT 1472213 Query 70 CCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTA 129 ||||||||| ||||||||||| | ||||||| ||||||||||||| || ||||||| | | Sbjct 1472214 CCGGAATTATTGGGCGTAAAGCGCGCGTAGGCGGTTTCTTAAGTCTGATGTGAAAGCCCA 1472273 Query 130 TGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGG 189 ||||||||| || | || ||||||| || |||||||| || || |||||| Sbjct 1472274 CGGCTCAACCGTGGAGGGTCATTGGAAACTGGGAAACTTGAGTGCAGAAGAGGAAAGTGG 1472333 Query 190 AATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGG 249 |||||| |||||||||||||||||| ||| || |||||||||||||||||||||||| Sbjct 1472334 AATTCCATGTGTAGCGGTGAAATGCGCAGAGATATGGAGGAACACCAGTGGCGAAGGCGA 1472393 Query 250 CTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATA 309 ||| |||| ||||||||||| |||| | |||||||||||||| |||||||||||||||| Sbjct 1472394 CTTTCTGGTCTGTAACTGACGCTGATGTGCGAAAGCGTGGGGATCAAACAGGATTAGATA 1472453 Query 310 CCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGG 369 |||||||||||||||||||||||||||| | ||| |||| ||| | | | | | Sbjct 1472454 CCCTGGTAGTCCACGCCGTAAACGATGAGTGCTAAGTGTTAGGGGGTTTCCGCCCCTTAG 1472513 Query 370 TGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 ||| ||||| |||||| |||| | ||| ||||||||||| Sbjct 1472514 TGCTGCAGCTAACGCATTAAGCACTCCGCCTGGGGAGTA 1472552 Score = 149 bits (164), Expect = 2e-33 Identities = 94/102 (92%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 10 AGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTAT 69 || ||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct 1198008 AGAAAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTAT 1198067 Query 70 CCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAA 111 ||||||||| ||||||||||| | ||||||| |||||||||| Sbjct 1198068 CCGGAATTATTGGGCGTAAAGCGCGCGTAGGCGGTTTCTTAA 1198109 >seq48 Length=4448091 Score = 253 bits (280), Expect = 5e-65 Identities = 230/288 (80%), Gaps = 4/288 (1%) Strand=Plus/Minus Query 9 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA 68 || |||| || |||||||| |||||||||||||||||||||||| || |||||||||||| Sbjct 3382890 GAAGAAGTCCTGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGAGGGCTAGCGTTA 3382831 Query 69 TCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCT 128 | |||||||| ||||||||||| | ||||||| | || ||||| | | |||||| | Sbjct 3382830 TTCGGAATTATTGGGCGTAAAGAGCGCGTAGGCTGGTTAGTAAGTTAAAAGTGAAATCCC 3382771 Query 129 ATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAG--TGCAGGAGGGGCAAG 186 | ||||||| || | ||||||| ||||||| |||||| || | |||| || Sbjct 3382770 AAAGCTCAACTTTGGAATTGCTTTTAAAACTGCTAACCTAGAGATTGAAAGAGGAT--AG 3382713 Query 187 TGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGG 246 |||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||| Sbjct 3382712 AGGAATTCCTAGTGTAGAGGTGAAATTCGTAAATATTAGGAGGAACACCAGTGGCGAAGG 3382653 Query 247 CGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGC 294 || || |||| | ||||| ||||||| |||| ||||| ||||| Sbjct 3382652 CGTCTATCTGGTTCAAATCTGACGCTGAGGCGCGAAGGCGTGAGGAGC 3382605 >seq158 Length=85213 Score = 192 bits (212), Expect = 1e-46 Identities = 130/146 (89%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 194 CCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTG 253 |||||||||| |||||||| |||| |||||||||||||||||||||||||||||| || Sbjct 25597 CCTAGTGTAGAGGTGAAATTCGTAAATATTAGGAGGAACACCAGTGGCGAAGGCGTCTAT 25656 Query 254 CTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCT 313 |||| | ||||| ||||||| |||| |||||||||||||||||||||||||||||| Sbjct 25657 CTGGTTCAAATCTGACGCTGAGGCGCGAAGGCGTGGGGAGCAAACAGGATTAGATACCCT 25716 Query 314 GGTAGTCCACGCCGTAAACGATGAAT 339 |||||||||||| ||||||||||||| Sbjct 25717 GGTAGTCCACGCTGTAAACGATGAAT 25742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203183131136