Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq27 224 2e-56 seq1 221 2e-55 seq67 215 1e-53 seq21 181 2e-43 seq113 168 1e-39 seq26 140 6e-31 seq33 73.4 7e-11 >seq27 Length=6825462 Score = 224 bits (248), Expect = 2e-56 Identities = 207/258 (80%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||| ||||| ||||| ||||| || | ||||| |||||||||||||||| Sbjct 454619 CTTCTTAAGGGGACAGGCGGCTTTTAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 454562 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| ||||||||||||||||||||||||| || || || || | | Sbjct 454561 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTGTGCGTTC 454502 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||||||||| |||||| |||||| | | || ||| ||||||| || || | | ||| Sbjct 454501 CCTTGGCCGAAAGGTCCGGGTAACCCGCTGAACCTCCTTCGTGCTAGGAATTGGGGCTTG 454442 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | |||||||||| || |||||||||| ||||| ||| |||||||||| Sbjct 454441 CAATTGTTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 454382 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 454381 ACGTCCCTGCCCTTTGTA 454364 >seq1 Length=33720124 Score = 221 bits (244), Expect = 2e-55 Identities = 206/258 (80%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||| ||||| ||| | | ||||| | || | ||||| || ||||||||||||| Sbjct 17880634 CTTCTTAAGGGGACAGGCGGATTCTAGCCGCTCGA-GATTGAG-CAGTAACAGGTCTGTG 17880691 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| ||||||||||||||||||||||||| || || || || | | Sbjct 17880692 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTGTGCGTTC 17880751 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||||||||| |||||| |||||| | | || ||| ||||||| || || | | ||| Sbjct 17880752 CCTTGGCCGAAAGGTCCGGGTAACCCGCTGAACCTCCTTCGTGCTAGGAATTGGGGCTTG 17880811 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | |||||||||| || |||||||||| ||||| || |||||||||| Sbjct 17880812 CAATTGTTTCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAGGCTCGCGTTGATT 17880871 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 17880872 ACGTCCCTGCCCTTTGTA 17880889 >seq67 Length=2655711 Score = 215 bits (238), Expect = 1e-53 Identities = 205/258 (79%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||| ||||| ||||| ||||| || | ||||| |||||||||||||||| Sbjct 1168151 CTTCTTAAGGGGACAGGCGGCTTTTAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 1168208 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| ||||||||||||||||||||||||| || || || || || Sbjct 1168209 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTGTGCACAC 1168268 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||||||||| || ||| |||||| | | || ||| ||||||| || || | | ||| Sbjct 1168269 CCTTGGCCGAAATGTCCGGGTAACCCGCTGAACCTCCTTCGTGCTAGGAATTGGGGCTTG 1168328 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | |||||||||| || |||||||||| ||||| ||| |||||||||| Sbjct 1168329 CAATTGTTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 1168388 Query 311 ACGTCCCTGCCCTTTGTA 328 ||||||| |||||||||| Sbjct 1168389 ACGTCCCCGCCCTTTGTA 1168406 >seq21 Length=9672676 Score = 181 bits (200), Expect = 2e-43 Identities = 177/224 (79%), Gaps = 12/224 (5%) Strand=Plus/Minus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 7172780 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCTGGGCCGCACGAGCGCTAC 7172722 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTG-TTAAAC 224 ||||| || || || || | | ||||||||| |||||| |||||| || | | || | Sbjct 7172721 ACTGAAGGAATCAGCGTGTGCGTTCCCTTGGCCGAAAGGTCCGGGTAA-CTCGCTGAACC 7172663 Query 225 TCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAA 284 || || | ||||| |||||||| || | | |||||| ||| || ||||| Sbjct 7172662 TCCTTCAT--TGGGG-------CTTGCAATTGTTCTCCATGAACGAGCAATTCCCAGTAA 7172612 Query 285 GCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||| ||||| ||| ||||||||||| |||||||||||||||| Sbjct 7172611 GCGCGAGTCATAAGCTCGCGTTGATTATGTCCCTGCCCTTTGTA 7172568 >seq113 Length=742160 Score = 168 bits (186), Expect = 1e-39 Identities = 194/258 (75%), Gaps = 21/258 (8%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||| ||||| | ||||| ||||| || | | ||| |||||||||||||||| Sbjct 143402 CTTCTTAAGGGGACAAGCGGCTTTTAGCCGCACGA-GATGGAG-CAATAACAGGTCTGTG 143459 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| |||||||||||||||||||| |||| || ||| Sbjct 143460 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACGCTGAAGGA------------ATCC 143507 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 |||| || |||| ||||| | | || | || |||||||| | || | | ||| Sbjct 143508 CCTTCGC-----GGTCCGGGTACCCCGCTGAACCCCT-TCGTGCTGCGAATTGGGGCTTG 143561 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | |||||||||| || |||||||||| ||||| ||| |||||||||| Sbjct 143562 CAATTGTTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 143621 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||| ||||||||| Sbjct 143622 ACGTCCCTACCCTTTGTA 143639 >seq26 Length=6747920 Score = 140 bits (154), Expect = 6e-31 Identities = 146/188 (78%), Gaps = 3/188 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||| ||||| ||||| ||||| || | ||||| |||||||||||||||| Sbjct 5494658 CTTCTTAAGGGGACAGGCGGCTTTTAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 5494715 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| ||||||||||||||||||||||||| || || || || | | Sbjct 5494716 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTGTGCGTTC 5494775 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||||||||| |||||| |||||| | | || ||| ||||||| || || | | ||| Sbjct 5494776 CCTTGGCCGAAAGGTCCGGGTAACCCGCTGAACCTCCTTCGTGCTAGGAATTGGGGCTTG 5494835 Query 251 CAATTATT 258 ||||| || Sbjct 5494836 CAATTGTT 5494843 >seq33 Length=4916808 Score = 73.4 bits (80), Expect = 7e-11 Identities = 51/58 (88%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 113 GGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 ||| | ||||||||||| |||| ||||||| | |||| |||||||||||||||||||| Sbjct 3714804 GGCCACAACAGGTCTGTAATGCTCTTAGATTTCCTGGTCCGCACGCGCGCTACACTGA 3714747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947186720256