Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq199 260 5e-67 seq13 86.0 2e-14 >seq199 Length=31678 Score = 260 bits (288), Expect = 5e-67 Identities = 333/450 (74%), Gaps = 13/450 (3%) Strand=Plus/Plus Query 33 TAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGG 92 ||||||||||||||||||||||| |||| |||| |||||||| ||||| || | |||| Sbjct 6280 TAGACCCGAAACCAAGTGATCTAGTCATGACCAGATTGAAGGTGTGGTAAAACACACTGG 6339 Query 93 AGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGC 152 ||| |||||| |||||||| || |||| ||||||| |||| |||||||||||||| Sbjct 6340 AGGATCGAACCAGTTAATGTTGCAACATTATTGGATGAGTTGTGATTAGGGGTGAAAGGC 6399 Query 153 TAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCT--CAAGT 210 || |||||||| ||||||||||||||| ||||| |||||||||||| || | | || Sbjct 6400 CAATCAAACTTGAAAATAGCTGGTTCTCCGCGAAATCTATTTAGGTAGAGCGTTGTATGT 6459 Query 211 ATCACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTACCAAACCAT 270 || | ||||||||||||||| | |||||||| | || ||||||||| | Sbjct 6460 AT-GTTGTTGGGGGTAGAGCACTGGATAGACTAGGGGGACTCACCGTCTTACCAAATCTA 6518 Query 271 TGCAAACTCCGAATGC---GCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGG 327 ||||||||||| | || | || ||| | || | || ||||||||| | Sbjct 6519 ACTAAACTCCGAATACCAATAATTAATTATACAAC-AGACACACTGC--GGGTGCTAA-G 6574 Query 328 TCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAG 387 |||||| | ||| || || || || | | |||||| ||| |||| ||||||||| Sbjct 6575 TCCGTGGTGAAAAGGGAAACAACCCAGATCACTATCTAAGGTCCCAAAATTACAGCTAAG 6634 Query 388 TTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTC 447 | || ||||| | | | |||||||||| ||||||||||||||||||| || Sbjct 6635 T--GGGGAAGGAAGTAGAAAAACCATTACAGCTAGGAGGTTGGCTTGGAAGCAGCCA-TC 6691 Query 448 ATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 |||||||| ||||||||||||||| ||| Sbjct 6692 CTTTAAAGAAAGCGTAACAGCTCACTTGTC 6721 >seq13 Length=9188118 Score = 86.0 bits (94), Expect = 2e-14 Identities = 72/87 (83%), Gaps = 1/87 (1%) Strand=Plus/Minus Query 412 AAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCA 471 |||||||| ||||||||||||| |||||||||| ||||||||||| |||||| ||| || Sbjct 7322161 AAGACAGCCAGGATGTTGGCTTAGAAGCAGCCA-TCATTTAAAGAAAGCGTAATAGCACA 7322103 Query 472 CTAGTCGAGGAGTCGGGCGTGGATAAT 498 || |||||| | | ||| ||| ||| Sbjct 7322102 CTGGTCGAGTCGGCCTGCGCGGAAAAT 7322076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689576311808