Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq37 77.0 5e-12 seq3 77.0 5e-12 >seq37 Length=6070101 Score = 77.0 bits (84), Expect = 5e-12 Identities = 89/114 (78%), Gaps = 6/114 (5%) Strand=Plus/Minus Query 2 TACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAG-T 60 ||||||||||||||| | ||| || |||||||| ||| | ||| | ||||| | | Sbjct 3283639 TACGAGAGGAACCGCAGG-TTCTGAC-AATTGGTTCATGCCTCGGTCGG--CAGGCCGGT 3283584 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||| ||||||| | |||||||| ||||||||||||||| | |||||| Sbjct 3283583 GGTGCGAAGTTACCATCCGTGGGATTATGCCTGAACGCCTCTAAG-CCGAATCC 3283531 >seq3 Length=17889087 Score = 77.0 bits (84), Expect = 5e-12 Identities = 89/115 (77%), Gaps = 4/115 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGG-CTGTCTGACCAGGCAG 59 |||||||||||||||| | ||| || |||||||| ||| | ||| ||| | | | Sbjct 5767045 GTACGAGAGGAACCGCAGG-TTCGGAC-AATTGGTTCATGCACTCGGTC-GACAGGCCGG 5767101 Query 60 TGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 || |||||| ||||||| | |||||||| ||||||||||||||| | |||||| Sbjct 5767102 TGGTGCGAAGTTACCATCCGTGGGATTATGCCTGAACGCCTCTAAGGCCGAATCC 5767156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819188873728