Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01]
1,402 sequences; 650,477,627 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq128 856 0.0
seq38 181 3e-43
seq28 150 5e-34
seq41 132 1e-28
seq14 123 8e-26
seq100 78.8 3e-12
>seq128
Length=163306
Score = 856 bits (948), Expect = 0.0
Identities = 492/504 (98%), Gaps = 0/504 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct 65876 GTACTCATTCCAATTACGAGACCCAAAAGAGCCCCGTATCAGTATTTATTGTCACTACCT 65935
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 65936 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 65995
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 65996 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGCCACCATGGTA 66055
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 66056 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 66115
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||
Sbjct 66116 CAAGGCCATGCGATTCGTTAAGTTATTATGATTCACCAAGGAGCCCCGAGGGGCATTGGT 66175
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 66176 TTTTTATCTAATAAATACACCCCTCCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 66235
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 66236 AATTACCACAGGTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 66295
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 66296 GCCATTCGCAGTTTCACAGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 66355
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 66356 AGACAAGCATATGACTACTGGCAG 66379
>seq38
Length=6425308
Score = 181 bits (200), Expect = 3e-43
Identities = 131/149 (88%), Gaps = 3/149 (2%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAA--GAGCCCTGTATCAGTATTTATTGTCACTAC 58
||||||||||| ||||| || || | | ||| || ||||| ||||| |||||||| |
Sbjct 245965 GTACTCATTCCGATTACGAGGCCTCATATCGAGTCCCGTATCGTTATTT-TTGTCACTGC 245907
Query 59 CTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118
|||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 245906 CTCCCCGTTCCGGGAGTGGGTAATTTGCGTGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 245847
Query 119 TTTCTCAGGCTCCCTCTCCGGAATCGAAC 147
|||||||||||||||||||||||||||||
Sbjct 245846 TTTCTCAGGCTCCCTCTCCGGAATCGAAC 245818
>seq28
Length=8196420
Score = 150 bits (166), Expect = 5e-34
Identities = 112/130 (86%), Gaps = 2/130 (2%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAA--GAGCCCTGTATCAGTATTTATTGTCACTAC 58
||||||||||| ||||| || || | | ||| || ||||| ||||| ||||||||||
Sbjct 3470707 GTACTCATTCCGATTACGAGGCCTCATATCGAGTCCCGTATCGTTATTTTTTGTCACTAC 3470648
Query 59 CTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118
|||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3470647 CTCCCCGTTCCGGGAGTGGGTAATTTGCGTGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 3470588
Query 119 TTTCTCAGGC 128
|| |||||||
Sbjct 3470587 TTACTCAGGC 3470578
>seq41
Length=5183572
Score = 132 bits (146), Expect = 1e-28
Identities = 270/394 (69%), Gaps = 29/394 (7%)
Strand=Plus/Minus
Query 3 ACTCATTCCAATTACAAGACCCAAAA--GAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||| | ||||| || || | | ||| || ||||| ||| | |||||||| |||
Sbjct 1920763 ACTCATTGCGATTACGAGGCCTCATATCGAGTCCCGTATCGTTATGTGTTGTCACTGCCT 1920704
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||| ||| || ||| || || ||||||| |||||||||||||||||
Sbjct 1920703 CCCCGTTCTGGGC--GGTTAACTTACGTGCCTGCT--------TGGATGTGGTAGCCGTT 1920654
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||| || | ||||||||||| ||||||| |||||||||||| ||| ||||||||
Sbjct 1920653 TCTCAAGCCCACTCTCCGGAATTGAACCCTGATTCCCCGTTACACGTAACAGCCATGGTA 1920594
Query 181 GGC-CACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239
| || || | ||||| |||||||| | ||| ||||||| || | |||
Sbjct 1920593 AACACAAAGTCGTTTCATCGCCAGTTGATAAGTCAGGCATTTGAAAGATAAGTTGCCAAA 1920534
Query 240 TC-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAA--------GGAGCCCCGAA 290
| ||| ||||||||| | | ||| | || |||| || | |
Sbjct 1920533 ACGAAGACCATGCGATCTGCAGTGCTATCTAGCTTCCCCAACTTATCTCCCAGACTGGCG 1920474
Query 291 GGGCGTTGGTTTTTTATCTAATAAATACACCCCT---TCCGAA--GTC-GGGGTTTTTAG 344
||||| | | | || | ||||||| | | |||| |||| ||| || || | |
Sbjct 1920473 GGGCGATTGGTCTTGGTTTAATAAA-AGAGCCCTGACCACGAATGGTCACGGCTTGGTTG 1920415
Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCA 378
||||||||||||||||||||||||| ||||||||
Sbjct 1920414 CATGTATTAGCTCTAGAATTACCACAGTTATCCA 1920381
>seq14
Length=11141052
Score = 123 bits (136), Expect = 8e-26
Identities = 125/158 (79%), Gaps = 6/158 (4%)
Strand=Plus/Minus
Query 71 GGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCT- 129
||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 2262880 GGAGTGGGTAATTTGCGTGCCTGCTGCCTTCCTTGGATGTGGTAGCCATTTCTCAGGCTT 2262821
Query 130 --CCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATA-CCATGGTAGGCCAC 186
|||| |||||||||||||| ||| | | |||| | | | | |||||||| | |||
Sbjct 2262820 CCTCCTCGCCGGAATCGAACCCCGATTTCTTGCTACCTGGTAACAGCCATGGTA-GACAC 2262762
Query 187 TATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAA 224
| |||||||| |||||| | | || |||||||
Sbjct 2262761 -AGTCTACCATCAGCAGTTGACAAGTGAGGCATTTGAA 2262725
>seq100
Length=1718286
Score = 78.8 bits (86), Expect = 3e-12
Identities = 71/89 (80%), Gaps = 3/89 (3%)
Strand=Plus/Minus
Query 59 CTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118
|||| ||| ||||| | ||||||||||| || || |||||||||| || | |||||
Sbjct 1604753 CTCCGAGTGCCGGGAGTTGGTAATTTGCGTGCATGTCGCCTTCCTTG---GTTGAAGCCG 1604697
Query 119 TTTCTCAGGCTCCCTCTCCGGAATCGAAC 147
|| |||| ||| | |||||||||||||||
Sbjct 1604696 TTCCTCATGCTTCGTCTCCGGAATCGAAC 1604668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510378824192
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |