Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq128 856 0.0 seq38 181 3e-43 seq28 150 5e-34 seq41 132 1e-28 seq14 123 8e-26 seq100 78.8 3e-12 >seq128 Length=163306 Score = 856 bits (948), Expect = 0.0 Identities = 492/504 (98%), Gaps = 0/504 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct 65876 GTACTCATTCCAATTACGAGACCCAAAAGAGCCCCGTATCAGTATTTATTGTCACTACCT 65935 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 65936 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 65995 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 65996 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGCCACCATGGTA 66055 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 66056 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 66115 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||| Sbjct 66116 CAAGGCCATGCGATTCGTTAAGTTATTATGATTCACCAAGGAGCCCCGAGGGGCATTGGT 66175 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 66176 TTTTTATCTAATAAATACACCCCTCCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 66235 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 66236 AATTACCACAGGTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 66295 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 66296 GCCATTCGCAGTTTCACAGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 66355 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 66356 AGACAAGCATATGACTACTGGCAG 66379 >seq38 Length=6425308 Score = 181 bits (200), Expect = 3e-43 Identities = 131/149 (88%), Gaps = 3/149 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAA--GAGCCCTGTATCAGTATTTATTGTCACTAC 58 ||||||||||| ||||| || || | | ||| || ||||| ||||| |||||||| | Sbjct 245965 GTACTCATTCCGATTACGAGGCCTCATATCGAGTCCCGTATCGTTATTT-TTGTCACTGC 245907 Query 59 CTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118 |||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct 245906 CTCCCCGTTCCGGGAGTGGGTAATTTGCGTGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 245847 Query 119 TTTCTCAGGCTCCCTCTCCGGAATCGAAC 147 ||||||||||||||||||||||||||||| Sbjct 245846 TTTCTCAGGCTCCCTCTCCGGAATCGAAC 245818 >seq28 Length=8196420 Score = 150 bits (166), Expect = 5e-34 Identities = 112/130 (86%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAA--GAGCCCTGTATCAGTATTTATTGTCACTAC 58 ||||||||||| ||||| || || | | ||| || ||||| ||||| |||||||||| Sbjct 3470707 GTACTCATTCCGATTACGAGGCCTCATATCGAGTCCCGTATCGTTATTTTTTGTCACTAC 3470648 Query 59 CTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118 |||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct 3470647 CTCCCCGTTCCGGGAGTGGGTAATTTGCGTGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 3470588 Query 119 TTTCTCAGGC 128 || ||||||| Sbjct 3470587 TTACTCAGGC 3470578 >seq41 Length=5183572 Score = 132 bits (146), Expect = 1e-28 Identities = 270/394 (69%), Gaps = 29/394 (7%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACCCAAAA--GAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||| | ||||| || || | | ||| || ||||| ||| | |||||||| ||| Sbjct 1920763 ACTCATTGCGATTACGAGGCCTCATATCGAGTCCCGTATCGTTATGTGTTGTCACTGCCT 1920704 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||| ||| || ||| || || ||||||| ||||||||||||||||| Sbjct 1920703 CCCCGTTCTGGGC--GGTTAACTTACGTGCCTGCT--------TGGATGTGGTAGCCGTT 1920654 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||| || | ||||||||||| ||||||| |||||||||||| ||| |||||||| Sbjct 1920653 TCTCAAGCCCACTCTCCGGAATTGAACCCTGATTCCCCGTTACACGTAACAGCCATGGTA 1920594 Query 181 GGC-CACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 | || || | ||||| |||||||| | ||| ||||||| || | ||| Sbjct 1920593 AACACAAAGTCGTTTCATCGCCAGTTGATAAGTCAGGCATTTGAAAGATAAGTTGCCAAA 1920534 Query 240 TC-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAA--------GGAGCCCCGAA 290 | ||| ||||||||| | | ||| | || |||| || | | Sbjct 1920533 ACGAAGACCATGCGATCTGCAGTGCTATCTAGCTTCCCCAACTTATCTCCCAGACTGGCG 1920474 Query 291 GGGCGTTGGTTTTTTATCTAATAAATACACCCCT---TCCGAA--GTC-GGGGTTTTTAG 344 ||||| | | | || | ||||||| | | |||| |||| ||| || || | | Sbjct 1920473 GGGCGATTGGTCTTGGTTTAATAAA-AGAGCCCTGACCACGAATGGTCACGGCTTGGTTG 1920415 Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCA 378 ||||||||||||||||||||||||| |||||||| Sbjct 1920414 CATGTATTAGCTCTAGAATTACCACAGTTATCCA 1920381 >seq14 Length=11141052 Score = 123 bits (136), Expect = 8e-26 Identities = 125/158 (79%), Gaps = 6/158 (4%) Strand=Plus/Minus Query 71 GGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCT- 129 ||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct 2262880 GGAGTGGGTAATTTGCGTGCCTGCTGCCTTCCTTGGATGTGGTAGCCATTTCTCAGGCTT 2262821 Query 130 --CCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATA-CCATGGTAGGCCAC 186 |||| |||||||||||||| ||| | | |||| | | | | |||||||| | ||| Sbjct 2262820 CCTCCTCGCCGGAATCGAACCCCGATTTCTTGCTACCTGGTAACAGCCATGGTA-GACAC 2262762 Query 187 TATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAA 224 | |||||||| |||||| | | || ||||||| Sbjct 2262761 -AGTCTACCATCAGCAGTTGACAAGTGAGGCATTTGAA 2262725 >seq100 Length=1718286 Score = 78.8 bits (86), Expect = 3e-12 Identities = 71/89 (80%), Gaps = 3/89 (3%) Strand=Plus/Minus Query 59 CTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118 |||| ||| ||||| | ||||||||||| || || |||||||||| || | ||||| Sbjct 1604753 CTCCGAGTGCCGGGAGTTGGTAATTTGCGTGCATGTCGCCTTCCTTG---GTTGAAGCCG 1604697 Query 119 TTTCTCAGGCTCCCTCTCCGGAATCGAAC 147 || |||| ||| | ||||||||||||||| Sbjct 1604696 TTCCTCATGCTTCGTCTCCGGAATCGAAC 1604668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510378824192