Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_007902.1 Length=52162 Score E Sequences producing significant alignments: (Bits) Value seq157 98.7 3e-16 >seq157 Length=245904 Score = 98.7 bits (108), Expect = 3e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31620 ATGGGCCAAGTCGCATTTGATACGCAAGAGTTTGTAGAGATGCTGGAGAATGCAGGTTTG 31679 ||||||||||||||||||||||| |||||||| || |||| |||||| | | ||| | Sbjct 213065 ATGGGCCAAGTCGCATTTGATACTCAAGAGTTCGTCGAGAAGCTGGAAAGCTCTGGTCTT 213124 Query 31680 CCAAAAGACCAGGCGCGGGCGATTTCTATCGCCGTACGCAAGTCTCACGAGGTGGCGGAT 31739 | ||| ||||| ||| || | | | || || |||| || ||||| || || Sbjct 213125 AATAGAGAGCAGGCCAAGGCTATAACCCTTGTTGTGCGTCAGTCCCATGAGGTTGCAGAC 213184 Query 31740 GTGGCGACCCGACGTGACCTTGAGGATGCCAAGAAAGACATCGGGGCTAGATTCGATAAG 31799 | || ||| ||||||||||| || | ||||| || || | || || ||| Sbjct 213185 CTTGCTACCAAGCGTGACCTTGAAGACGTGCGCAAAGAGATGCAAGCCCGCTTTGAAAAG 213244 Query 31800 GTCGATGCCCAGATAGCCGAAGTGCGCAAAGA 31831 |||||| ||||||||||| |||||||| || Sbjct 213245 ACCGATGCGCAGATAGCCGATGTGCGCAAGGA 213276 Score = 96.9 bits (106), Expect = 1e-15 Identities = 121/165 (73%), Gaps = 1/165 (1%) Strand=Plus/Plus Query 2491 AAAACAGGAGAACCAGCCCATGGGCCAAGTCGCATTTGATACGCAAGAGTTCGTCGAGAC 2550 || ||||||| | | || ||||||||||||||||||||||| |||||||||||||||| Sbjct 213047 AACACAGGAGGATCCGCT-ATGGGCCAAGTCGCATTTGATACTCAAGAGTTCGTCGAGAA 213105 Query 2551 GCTGGAGAACGCCGGTTTACCGAAAGACCAGGCGCGGGCGATTTCTATCGCTGTTCGCAA 2610 |||||| | | | ||| | | ||| ||||| ||| || | | | ||| || | Sbjct 213106 GCTGGAAAGCTCTGGTCTTAATAGAGAGCAGGCCAAGGCTATAACCCTTGTTGTGCGTCA 213165 Query 2611 GTCTCACGAGGTGGCGGATGTGGCGACCCGACGTGACCTTGAGGA 2655 ||| || ||||| || || | || ||| ||||||||||| || Sbjct 213166 GTCCCATGAGGTTGCAGACCTTGCTACCAAGCGTGACCTTGAAGA 213210 Score = 86.0 bits (94), Expect = 2e-12 Identities = 99/132 (75%), Gaps = 6/132 (5%) Strand=Plus/Plus Query 31620 ATGGGCCAAGTCGCATTTGATAC---GCAAGAGTTTGTAGAGATGCTGGAGAATGCAGGT 31676 ||||||||||||||||||||||| ||| | | | |||| || || | || || Sbjct 34850 ATGGGCCAAGTCGCATTTGATACATTGCAGGCATCAGAAGAG---CTTGAAACCGCTGGC 34906 Query 31677 TTGCCAAAAGACCAGGCGCGGGCGATTTCTATCGCCGTACGCAAGTCTCACGAGGTGGCG 31736 | | | ||| ||||| |||||||||| ||| ||||||||||||||| || |||||| Sbjct 34907 ATCTCTAGAGAACAGGCTAGGGCGATTTCGCTCGTCGTACGCAAGTCTCATGAAGTGGCG 34966 Query 31737 GATGTGGCGACC 31748 ||||| || ||| Sbjct 34967 GATGTCGCTACC 34978 Score = 80.6 bits (88), Expect = 9e-11 Identities = 110/151 (73%), Gaps = 7/151 (5%) Strand=Plus/Plus Query 2491 AAAACAGGAGAACCAGCCCATGGGCCAAGTCGCATTTGATAC---GCAAGAGTTCGTCGA 2547 || ||||||| | | || ||||||||||||||||||||||| ||| | | | || Sbjct 34832 AACACAGGAGGATCCGCT-ATGGGCCAAGTCGCATTTGATACATTGCAGGCATCAGAAGA 34890 Query 2548 GACGCTGGAGAACGCCGGTTTACCGAAAGACCAGGCGCGGGCGATTTCTATCGCTGTTCG 2607 | || || | ||| || | | | ||| ||||| |||||||||| ||| || || Sbjct 34891 G---CTTGAAACCGCTGGCATCTCTAGAGAACAGGCTAGGGCGATTTCGCTCGTCGTACG 34947 Query 2608 CAAGTCTCACGAGGTGGCGGATGTGGCGACC 2638 ||||||||| || ||||||||||| || ||| Sbjct 34948 CAAGTCTCATGAAGTGGCGGATGTCGCTACC 34978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166794023041776