Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_031940.1 Length=77375 Score E Sequences producing significant alignments: (Bits) Value seq157 102 4e-17 >seq157 Length=245904 Score = 102 bits (112), Expect = 4e-17 Identities = 278/414 (67%), Gaps = 29/414 (7%) Strand=Plus/Minus Query 28042 GGTGCCGGGATTGGCGTCCTGGAATTGTTATCG--GCGACA-AATGACGCGCCT---GCG 28095 |||||||||||| |||| | | ||| || | |||||| |||||| |||| ||| Sbjct 212027 GGTGCCGGGATTAGCGTTCCG---TTGAGATTGTCGCGACAGAATGACACGCCGCGAGCG 211971 Query 28096 TCTTTTTTATTGTCGCAGCTCGGCTATATCCAAATT---ATGGTGGGCTGGGTAGGGGCA 28152 | |||||| ||||||| || || ||| || |||||||||||| | ||| | Sbjct 211970 TGTTTTTTTATGTCGCACATC-----TAGCCACATATCAATGGTGGGCTGGATGGGGCAA 211916 Query 28153 CCGAAAGGTGCGCCGGTTTCCGATAACGCCGGTTACGCCAACCCTGCTCAGTTCACCACC 28212 ||| ||||| ||||| | || || ||||| |||| ||| | ||||||||||||| Sbjct 211915 CCGCAAGGTTGGCCGGAT---GACAATCCCGGTAACGCTAACTCCATTCAGTTCACCACC 211859 Query 28213 AGT--GAAATTGGCGTTTC-CGGTGGTGGAGTCACATCCAAGTTATCGGAGGCGGCCATC 28269 | | || || |||| || ||||||| |||| | || || || || || || ||| Sbjct 211858 AATCAGAGGTTAGCGTCTCTCGGTGGT-GAGT-AAATTCAGATTGTCACCGGAGGTCATT 211801 Query 28270 ATG--GCTACAGTCCCAACTCTCGCTCAACCTGAAATCAGTGTTATTAACGGGCAAGCCG 28327 ||| || || | || | || || |||| || | | | | ||||| |||| | Sbjct 211800 ATGACACTTCA--CTCATCCCTTGCCGCACCTAAAGTTACTATCCACAACGGTAAAGCTG 211743 Query 28328 TTACTTCTTCCCTTGCTGTTGCCGACTACTTCACCAAACGTCATGACGATGTTCTGAAAA 28387 |||| | ||| | |||||| || ||||| ||||||||| ||| | || ||| Sbjct 211742 TTACCACATCCAAAGATGTTGCAGATTACTTTGGCAAACGTCACGACAACGTGCTGCGCG 211683 Query 28388 AGATCCGCGCACTTGATTGCTCTCCTGAGTTTACTGCCCGCAATTTTGCGGTGA 28441 ||| | |||||||| ||| || | ||| ||| | |||||||| || || Sbjct 211682 CTATCGATTCCCTTGATTGTTCTGCTAATTTTCATGCACTCAATTTTGAGGAGA 211629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247470971422192