Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq135053 333 5e-89 >seq135053 Length=5356 Score = 333 bits (368), Expect = 5e-89 Identities = 268/320 (84%), Gaps = 3/320 (1%) Strand=Plus/Plus Query 18 TGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCGGTGACGG 77 ||||||||| |||||| ||| |||||||||||||||||||| || | ||||||| Sbjct 2655 TGAAATAGAACCTGAAACCGTACGCCTACAAGCGGTCGGAGCATTGTTAAGATGTGACGG 2714 Query 78 CGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGGCTTCAG 137 ||||||||||||||||||||||||||||||| | ||||| ||||||||||| |||||| Sbjct 2715 CGTGCCTTTTGCATAATGAGCCTACGAGTTAAT-GTCACTGGCGAGGTTAAGTACTTCAG 2773 Query 138 GCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG-AGTTGGTGGCGCTAGACG 196 | || |||||||| ||||||||| ||||| |||||| ||| |||| |||||| Sbjct 2774 GTACGG-AGCCGAAGCGAAAGCGAGTCTTAATAGGGCGTTATAGTCAGTGGTATTAGACG 2832 Query 197 CGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAGGACC 256 |||||||| |||||||||||| | ||||||||||| |||||| | ||||||||| Sbjct 2833 CGAAACCTAGTGATCTACCCATGGGCAGGTTGAAGCTTTGGTAACACAAAGTGGAGGACC 2892 Query 257 GAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCAATCA 316 |||||||| |||||||||||| |||||||||| | ||||||||||||||||||||||| Sbjct 2893 GAACCGGTTGACGTTGAAAAGTCTTCGGATGACCTGTGGGTAGGGGTGAAAGGCCAATCA 2952 Query 317 AACTGGGAAATAGCTCGTAC 336 |||||||||||||||||||| Sbjct 2953 AACTGGGAAATAGCTCGTAC 2972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 971122883072