Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq135053 277 5e-72 >seq135053 Length=5356 Score = 277 bits (306), Expect = 5e-72 Identities = 269/346 (78%), Gaps = 0/346 (0%) Strand=Plus/Plus Query 9 AAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGT 68 ||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||| Sbjct 638 AAGAATAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGT 697 Query 69 TAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATC 128 || |||| ||| |||| ||||| || || |||||| | |||| ||| |||||||| Sbjct 698 TATCCGGATTTATTGGGTTTAAAGGGTCCGTAGGCGGATTAATAAGTCAGTGGTGAAATC 757 Query 129 CCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGG 188 || ||| ||| |||| ||| ||| |||| | || ||||| | | | || Sbjct 758 CCGTCGCTCAACGATGGAACTGCCATTGATACTGTTAGTCTTGAGTGAGGTTGCAGTGGC 817 Query 189 TGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGG 248 |||||| ||||||| ||||||||| ||||||| | ||||||||||| ||||||| Sbjct 818 TGGAATGTGTAGTGTAGCGGTGAAATGCTTAGATATTACGCGGAACACCAATTGCGAAGG 877 Query 249 CAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAG 308 ||| | || | ||||||||| ||| ||||||||||||||||| ||||||||||| Sbjct 878 CAGGTCACTAAGCCTTAACTGACGCTGATGGACGAAAGCGTGGGGAGCGAACAGGATTAG 937 Query 309 ATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGG 354 ||||||||||||||||||| |||||||| ||| | ||||||| Sbjct 938 ATACCCTGGTAGTCCACGCTGTAAACGATGGATACTTGCTGTTGGG 983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1287376716704