Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq135053 111 2e-22 >seq135053 Length=5356 Score = 111 bits (122), Expect = 2e-22 Identities = 173/248 (70%), Gaps = 21/248 (8%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| ||||||||||| ||||| || ||||| || || | | || ||| Sbjct 3943 CTTAACCTTCCAGCACCGGGCAGGTGTCAGACCCTATACGTCATCTCTCGATTTT-GCAG 3885 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | ||||||||||| ||||||||||| | || || ||||| ||| | Sbjct 3884 AGTCCTGTGTTTTTGATAAACAGTCGCCTGGGCCTTTTTACTGCG----------GCTGA 3835 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 | || ||| | | | ||||||||||||||| || | |||||||| || Sbjct 3834 CTATAATGT-------CAGCGAC---CTTTCTCCCGAAGTTACAGGTCTATTTTGCCTAA 3785 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 ||||||| ||| |||| ||| ||||| || || |||| | ||| |||||||||||| Sbjct 3784 TTCCTTAGCCATGACTCACTCGAGCGCCTGAGGATACTCTCCTCGACTACCTGTGTCGGT 3725 Query 241 TTACGGTA 248 |||||||| Sbjct 3724 TTACGGTA 3717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 693240258473