Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq135053 122 9e-26 >seq135053 Length=5356 Score = 122 bits (134), Expect = 9e-26 Identities = 135/178 (76%), Gaps = 9/178 (5%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 || |||| |||||| ||||||| | || ||| || ||||||| |||||| ||| || || Sbjct 3720 CGTAAACCGACACAGGTAGTCGAGGAGAGTATCCTCAGGCGCTCGAGTGAGTCATGGCTA 3779 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141 ||||| |||||||| | ||||||||||||||| ||| |||| || || || | Sbjct 3780 AGGAATTAGGCAAAATAGACCTGTAACTTCGGGAGAAA-GGTCGCT-----GACATTATA 3833 Query 142 G---GGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 | | ||||| || ||| |||||| |||||||| |||||||||||| || ||| || Sbjct 3834 GTCAGCCGCAGTAAAAAGGCCCAGGCGACTGTTTATCAAAAACACAGGACTCTGCAAA 3891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530312824454