Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq135053 109 5e-22 >seq135053 Length=5356 Score = 109 bits (120), Expect = 5e-22 Identities = 80/93 (86%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 60 AGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATA 119 ||||| |||||||||||| |||||||||| |||||||||| ||| || |||||||| Sbjct 3850 AGGCCCAGGCGACTGTTTATCAAAAACACAGGACTCTGCAAAATCGAGAGATGACGTATA 3909 Query 120 GGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 |||| |||| |||||||||||| |||||||||| Sbjct 3910 GGGTCTGACACCTGCCCGGTGCTGGAAGGTTAA 3942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476003679781