Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq135053 298 1e-78 >seq135053 Length=5356 Score = 298 bits (330), Expect = 1e-78 Identities = 235/278 (85%), Gaps = 4/278 (1%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCG-GGTGGAGACAGCGCCGCCATCGT 71 |||||||||| | | | ||||||||| ||| ||| || ||||||| ||| ||||| Sbjct 4126 GCATCTTCACCGATACTACAATTTCACCGAG-CTCATGGCTGAGACAGTGCCCAGATCGT 4068 Query 72 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4067 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 4008 Query 132 ATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTT--AGCTAACCCC 189 || |||||||||||||||||| |||||||| | |||||||||| ||| |||||||| Sbjct 4007 ATAGTTACGGCCGCCGTTTACTGGGGCTTCAGTTAAGAGCTTCGAGTTGCCTCTAACCCC 3948 Query 190 ATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTG 249 | |||||||||| |||||||||||| |||| |||||||||||| || ||| |||| Sbjct 3947 CTTCCTTAACCTTCCAGCACCGGGCAGGTGTCAGACCCTATACGTCATCTCTCGATTTTG 3888 Query 250 CAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCT 287 |||||| |||||||||| |||||||||||| ||||| Sbjct 3887 CAGAGTCCTGTGTTTTTGATAAACAGTCGCCTGGGCCT 3850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1258626368192