Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq135053 361 1e-97 >seq135053 Length=5356 Score = 361 bits (400), Expect = 1e-97 Identities = 298/357 (83%), Gaps = 7/357 (2%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 || ||||||||||||||| | ||||||||||||||| || | |||||||||||||| Sbjct 4132 TAACCGGCATCTTCACCGATACTACAATTTCACCGAGCTCATGGCTGAGACAGTGCCCAG 4073 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 |||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 4072 ATCGTTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 4013 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGA-TTG-CTCTA 178 |||||||||||||||||||||||||||||||||| |||| | ||||||| ||| ||||| Sbjct 4012 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCAGTTAAGAGCTTCGAGTTGCCTCTA 3953 Query 179 ACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA 238 || ||||||||||||||||||||||||| ||||| ||||||| || ||| ||| Sbjct 3952 ACCCCCTTCCTTAACCTTCCAGCACCGGGCAGGTGTCAGACCCTATACGTCATCTCTCGA 3893 Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGC---CT 295 || ||||| |||||||||||| ||||||||||| ||||||| || ||||||| || Sbjct 3892 TTTTGCAGAGTCCTGTGTTTTTGATAAACAGTCGCCTGGGCCTTTTTACTGCGGCTGACT 3833 Query 296 GTCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 | || | || || || ||||||| ||||||| || |||||||| | ||||||| Sbjct 3832 ATAAT-GTCA-GCGACCTTTCTCCCGAAGTTACAGGTCTATTTTGCCTAATTCCTTA 3778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1060568411776