Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq135053 470 4e-130 >seq135053 Length=5356 Score = 470 bits (520), Expect = 4e-130 Identities = 410/501 (82%), Gaps = 13/501 (3%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1034 TACGTCCGCAAGGATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 1093 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTT-GACATCCTCTGACCCCT 119 |||||||||||||| | |||||| |||||||||||| ||| | | | |||| Sbjct 1094 GTGGTTTAATTCGATGATACGCGAGGAACCTTACCAAGGCTTAAATGTATTTTGACAGGA 1153 Query 120 CTAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCA 179 ||||| ||| |||| |||| ||||||| || ||||| ||||||| |||||||| Sbjct 1154 CTAGAAATA---GTTTTTTCTTC---GGACAGAATGCAAGGTGCTGCATGGCTGTCGTCA 1207 Query 180 GCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTG 239 ||||||| |||||| |||| |||||||||| |||||||||||||||| || ||||||| Sbjct 1208 GCTCGTGCCGTGAGGTGTTAGGTTAAGTCCTGCAACGAGCGCAACCCCTATCATTAGTTG 1267 Query 240 CCATCATT--AAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCG-GAGGAAGGTGG 296 ||| | || ||| ||| ||||||| ||||||| | ||| | ||||||||||| Sbjct 1268 CCAGCGTTTAAAGACGGGGACTCTAATGAGACTGCCAACG-CAAGTTGTGAGGAAGGTGG 1326 Query 297 GGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACA 356 |||||||||||| |||||| | |||||| | ||||||||||||||||||||||||| | Sbjct 1327 GGACGACGTCAAGTCATCACGGCCCTTACGTCTTGGGCTACACACGTGCTACAATGGTAA 1386 Query 357 ATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGG 416 |||| |||||||| | || | ||||| | || |||| | ||| || ||||||||||| Sbjct 1387 GTACAGAGGGCAGCTACACTGTGAGGTGATGCGAATCTTAAAAACTT-ATCTCAGTTCGG 1445 Query 417 ATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CAT 475 |||| |||||||||||||||| |||||||||||||||||||||||||| | ||||| ||| Sbjct 1446 ATTGGAGTCTGCAACTCGACTCTATGAAGCTGGAATCGCTAGTAATCGCATATCAGCCAT 1505 Query 476 GCTACGGTGAATACGTTCCCG 496 | | ||||||||||||||||| Sbjct 1506 GATGCGGTGAATACGTTCCCG 1526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1501407088960