Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq53564 205 2e-50 seq138038 181 2e-43 seq96253 174 3e-41 seq135053 73.4 7e-11 >seq53564 Length=5556 Score = 205 bits (226), Expect = 2e-50 Identities = 165/198 (83%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95 |||||||||||||||| | || || |||| | |||||||||||| ||||||| | | | Sbjct 1581 AGTAGGGTAAAACTAAATTTTCACACGACGAACCAAACCCAGCTCAGGTTCCCT-TGAAT 1523 Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155 |||||||||||||||||||| ||||| ||| || |||||||||||||||||||| | Sbjct 1522 GGGTGAACAATCCAACGCTTGGTGAATTTTGCCTCACAATGATAGGAAGAGCCGACATTG 1463 Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215 ||||||||||| | |||||| |||||||||| || |||| |||| |||||||| | || Sbjct 1462 AAGGATCAAAATTCGACGTCGGTATGAACGCTCAGCCGCCAAAAGCTAGTTATCCTTATG 1403 Query 216 GTAACTTTTCTGGCACCT 233 |||||||||||| ||||| Sbjct 1402 GTAACTTTTCTGACACCT 1385 >seq138038 Length=1087 Score = 181 bits (200), Expect = 2e-43 Identities = 139/162 (86%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||| || || |||||||| |||||| ||| |||||| | |||||||||||||||||| Sbjct 538 TCATTAGAAGCGTAAAACTCACCTGTTTCACGACGGTTTGGACCCAGCTCACGTTCCCT- 596 Query 91 TTAGTGGGTGAACAATCCAACGCTTACC-GAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 | | ||||||||||||||||||||| ||||| |||||| |||||| ||||||||| Sbjct 597 TGAATGGGTGAACAATCCAACGCTTGTGTGAATTTTGCTTCACAATGATACGAAGAGCCG 656 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGC 191 |||||||||||||||||||| |||||| |||||||||||||| Sbjct 657 ACATCGAAGGATCAAAAAGCGACGTCGTTATGAACGCTTGGC 698 >seq96253 Length=3491 Score = 174 bits (192), Expect = 3e-41 Identities = 134/158 (85%), Gaps = 1/158 (1%) Strand=Plus/Minus Query 78 CTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGA 137 |||||||||||| | || |||||||||||||| || ||||| |||||| |||| Sbjct 717 CTCACGTTCCCTTGCA-TGTGTGAACAATCCAACATTTGGTGAATTTTGCTTCACTATGT 659 Query 138 TAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC 197 ||||||||||||||||||||||||| ||||| ||||||||||||||||| ||| ||||| Sbjct 658 TAGGAAGAGCCGACATCGAAGGATCGCAAAGCGACGTCGCTATGAACGCTGGGCCGCCAC 599 Query 198 AAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCT 235 ||||||||||| ||| ||||||| |||||| |||||| Sbjct 598 AAGCCAGTTATTCCTATGGTAACCTTTCTGATACCTCT 561 >seq135053 Length=5356 Score = 73.4 bits (80), Expect = 7e-11 Identities = 122/175 (70%), Gaps = 6/175 (3%) Strand=Plus/Minus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| ||| |||||||||| ||| || ||| |||| ||||| ||||| Sbjct 4683 CTGTCTCACGACGTTCTGAACCCAGCTCGCGTGCCACTTTAATGGGCGAACAGCCCAACC 4624 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||| |||| | | | ||| || ||||||||||||| | | || | Sbjct 4623 CTTGGGACC---TTCTCCAGCCCCAGGATGTGACGAGCCGACATCGAGGTGCCGAACCTC 4567 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| | ||| | ||||| | || |||| |||||||| | ||| ||||| Sbjct 4566 CCCGTCGATGTGAGCTCTTGGGGGAGACTAGCCTGTTATCCCCGGAGTACCTTTT 4512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 852927005856