Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq135053 300 6e-79 >seq135053 Length=5356 Score = 300 bits (332), Expect = 6e-79 Identities = 353/472 (75%), Gaps = 24/472 (5%) Strand=Plus/Minus Query 135 ACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTC 194 |||||||||||||||||||||||||||| || |||||| | ||||||||||||||||| Sbjct 2999 ACGCTGCACCTAAATGCATTTCGGGGAGTACGAGCTATTTCCCAGTTTGATTGGCCTTTC 2940 Query 195 ACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCG 254 ||||||| ||||||||||||| | |||||||| | | ||||||||||||||| Sbjct 2939 ACCCCTACCCACAGGTCATCCGAAGACTTTTCAACGTCAACCGGTTCGGTCCTCCACTTT 2880 Query 255 GTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTG 314 || ||||| |||||||||||||||||| ||||||||| | |||| ||| | | Sbjct 2879 GTGTTACCAAAGCTTCAACCTGCCCATGGGTAGATCACTAGGTTTCGCGTC----TAATA 2824 Query 315 CCACTCA----TACGCCCTATTCGGACTCGCTTTCGCTACGGCTAC---CCCACACGGGT 367 ||||| | |||||||||| |||||||||||||| ||||| | || | | Sbjct 2823 CCACTGACTATAACGCCCTATTAAGACTCGCTTTCGCTTCGGCTCCGTACCTGAAGTACT 2764 Query 368 TAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTG 427 ||||||||| | || |||||| ||||||||| | |||||||||||||||||| | Sbjct 2763 TAACCTCGCCA-GTGACATTAACTCGTAGGCTCATTATGCAAAAGGCACGCCGTCACAT- 2706 Query 428 GTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTC 487 | ||| || | |||||||| | |||||||| | |||||||||| ||||||| Sbjct 2705 ---CTTAA----CAAT---GCTCCGACCGCTTGTAGGCGTACGGTTTCAGGTTCTATTTC 2656 Query 488 -ACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCAC 546 ||| | | | |||||||||||||| |||| ||||| || | ||||||||| Sbjct 2655 AACTTTCTATTCGAAATGCTTTTCACCTTTCCTTCACAGTACTAGTTCACTATCGGTCTT 2596 Query 547 CAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTC 598 |||||||||||| ||| || ||||||| || ||||| || |||||| Sbjct 2595 TGAGGAGTATTTAGCCTTGGAGGATGGTCCCCCCTTATTCAAACAGAATTTC 2544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1814466439424