Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq135053 279 1e-72 >seq135053 Length=5356 Score = 279 bits (308), Expect = 1e-72 Identities = 323/419 (77%), Gaps = 21/419 (5%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||||||||| ||| |||||| ||||| | ||||||||||||||| || || ||| Sbjct 2931 CCACAGGTCAT-CCGAAGACTTTT-CAACGTCAACCGGTTCGGTCCTCCACTTTGT-GTT 2875 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| || ||| |||||||||||| || |||||| | ||||| || ||||| | || | Sbjct 2874 ACCAAAGCTT-CAACCTGCCCATGGG-TAGATCACTAGGTTT-CGCGTCTAATACC-ACT 2819 Query 129 GACTAGA-CGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC---CCT-ATTCGGTTAAG 183 ||||| | ||||||| ||||||||||||| |||| || |||| ||| | |||| Sbjct 2818 GACTATAACGCCCTATTAAGACTCGCTTT-CGCTTCGGCTCCGTACCTGAAGTACTTAAC 2760 Query 184 CTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCC---AA 240 || |||| ||| | ||| ||| | | |||||| ||||||| |||| ||||| || Sbjct 2759 CTC-GCCAGTGACATTAACTCGTAGGCTCATTATGCAAAAGGCACGCCGTCACATCTTAA 2701 Query 241 CAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTC 300 ||| | |||| || ||||||| || |||||||||||| ||||||||| || | Sbjct 2700 CAATG----CTCCGACCGCTTGTAGGCGTACGGTTTCAGGTTCTATTTCAACTTTCTATT 2645 Query 301 CGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATT 360 || | |||||| ||||||| |||| |||||||||||||||||||| | || |||||| Sbjct 2644 CGAAATGCTTTTCACCTTTCCTTCACAGTACTAGTTCACTATCGGTCTTTGAGGAGTATT 2585 Query 361 TAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 ||||||||||||||||||||||| |||||| ||| | ||||||||| |||| | ||||| Sbjct 2584 TAGCCTTGGAGGATGGTCCCCCCTTATTCAAACAGAATTTCTCGTGTTCCGCCTTACTC 2526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1239459469184