Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cirrula_20hians_20[genbank_20GCA_5F001015075.1_202015-05-29] 172,401 sequences; 399,685,866 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq26355 197 3e-48 seq135053 174 3e-41 >seq26355 Length=15530 Score = 197 bits (218), Expect = 3e-48 Identities = 231/308 (75%), Gaps = 23/308 (7%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||||||||| |||||||||| |||||| ||||||||||||||||||||||||||| Sbjct 111 GCTGGATCAGGGTTCCCCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCT 170 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||||||||||||||||||| |||||| | ||| |||||||| | |||| |||||||| Sbjct 171 GGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGAACAGCTAAAGATCGTCGC 230 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATA 186 |||||| ||| ||| | ||||||||| |||||| || || |||||| ||||| | Sbjct 231 CTTGGTAGGCCTTTACCCCACCAACTAGCTAATCTTCCATAGGCTCATCTTGTAGCGAGA 290 Query 187 AATCTTTGGTCAAAGAATGATGCCATCCTCT---GACATT-------ATGCGGTATTAGC 236 |||| ||| ||| || ||||| || || || |||||||||| Sbjct 291 -------GGTC--CGAA-GATCCC--CCTCTTTAAACCTTAGTCCACATCCGGTATTAGC 338 Query 237 GTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGT 296 |||| | ||||| ||| || |||| || || || | || |||||||||||| Sbjct 339 CACTCTTTCGAGTAGTTATCCCAAACTACAAGGTAGATTCCT-ATGTATTACTCACCCGT 397 Query 297 CCGCCACT 304 |||||||| Sbjct 398 CCGCCACT 405 >seq135053 Length=5356 Score = 174 bits (192), Expect = 3e-41 Identities = 220/299 (74%), Gaps = 9/299 (3%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||||| | |||||||| |||||| || |||||||||||||||||||||||| Sbjct 545 GCTGGATCAGGCGCTAACCCATTGTCCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCT 486 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 || |||||||||||| ||| ||||| ||||| |||||||| || ||| |||| ||| Sbjct 485 GGTCCGTGTCTCAGTACCAGTGTGGGGGTTCACCCTCTCAGGCCCCCTAAAGATCATCGC 426 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATA 186 |||||| || ||| | |||||||| |||||| ||| ||| ||| || |||||| Sbjct 425 CTTGGTAAGCCTTTACCCTACCAACTAGCTAATCTTACGCATGCCTATCCTTTCGCGATA 366 Query 187 AATCTTTGGTCAAAGAAT---GATGCC-ATCCTCTGACATTATGCGGTATTAGCGTTCGT 242 |||||| ||||| | | |||||| || | | |||||| |||||| | Sbjct 365 AATCTT---TCAAATATTATCGATGCCAATAATAT--TATTATGTAGTATTAATCCAAGC 311 Query 243 TTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCC 301 |||| | ||| |||||| || || | ||||| ||| ||||| ||||||| |||| Sbjct 310 TTCCCTGGGCTATCCCACTCGAAAGGGTAAGTTGCATACGCGTTACGCACCCGTGCGCC 252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 996678748416